RNA id: TU32901


Basic Information

Item Value
RNA id TU32901
length 252
lncRNA type inter_gene
GC content 0.33
exon number 2
gene id G26231
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29608317 ~ 29608596 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caatttaatttagtttttattagattacaaaaaaataattacaggatTACTCATAGAACATTTAAGGCCAGACAAAATATGCTGGACCAATCTTCTAACAAACATACTTAAGGCCattATTAACTGTTAGAAGCATTATCCGGCAAGAGGCTGTTTATTGTCCAAATCACTTCTTCTGCAGCAGCTCGATCATTTCAGGAACAGCCTGTGAATAAAACGACAGGACTGTTTGTAAAGATTggtaagaaataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32831 lncRNA downstream 242072 29365624 ~ 29366245 (-) True G26165
TU32805 lncRNA downstream 296374 29311618 ~ 29311943 (-) True G26147
TU32768 lncRNA downstream 375609 29230943 ~ 29232708 (-) True G26115
TU32742 lncRNA downstream 559152 29031410 ~ 29049165 (-) True G26092
TU32710 lncRNA downstream 606360 29001049 ~ 29001957 (-) False AMCG00007768
TU33039 lncRNA upstream 796402 30404998 ~ 30454628 (-) True G26342
TU33049 lncRNA upstream 823210 30431806 ~ 30437988 (-) True G26352
TU33076 lncRNA upstream 1001622 30610218 ~ 30611693 (-) True G26370
TU33115 lncRNA upstream 1191815 30800411 ~ 30875378 (-) True G26403
TU33130 lncRNA upstream 1295073 30903669 ~ 30903895 (-) True G26416
AMCG00007786 mRNA downstream 23090 29574334 ~ 29585227 (-) True AMCG00007786
AMCG00007782 mRNA downstream 170811 29428655 ~ 29437506 (-) True AMCG00007782
AMCG00007783 mRNA downstream 180842 29405388 ~ 29427475 (-) True AMCG00007783
AMCG00007778 mRNA downstream 222012 29379044 ~ 29386305 (-) True AMCG00007778
AMCG00007780 mRNA downstream 231238 29376246 ~ 29377079 (-) True AMCG00007780
AMCG00007789 mRNA upstream 8675 29617271 ~ 29640100 (-) True AMCG00007789
AMCG00007794 mRNA upstream 67321 29675917 ~ 29683071 (-) True AMCG00007794
AMCG00007791 mRNA upstream 120286 29728882 ~ 29735699 (-) True AMCG00007791
AMCG00007790 mRNA upstream 130142 29738738 ~ 29750579 (-) True AMCG00007790
AMCG00007792 mRNA upstream 148860 29757456 ~ 29765855 (-) True AMCG00007792
TU31949 other downstream 3976725 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 4343366 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 5340396 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 5635652 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 9135613 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 5260839 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 7631493 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 7886315 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 7959021 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 7962361 37570957 ~ 37571488 (-) True G27439

Expression Profile