RNA id: TU33704



Basic Information


Item Value
RNA id TU33704
length 298
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G26895
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 34266121 ~ 34266418 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctaagtccctttgaatagcctgtgctgccaagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcactaatatagatttgaaaaagcaaagtccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcgactcctctaatcgacaccctctgtttcctagacatcaaccagttcataatccatctacttacattaccctgaatgcctacagcttccaatttgaggatcagtctttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33673 lncRNA upstream 12567 34249196 ~ 34253554 (+) True G26875
TU33671 lncRNA upstream 12567 34249221 ~ 34253554 (+) False G26875
TU33615 lncRNA upstream 272139 33992178 ~ 33993982 (+) True G26825
TU33616 lncRNA upstream 275533 33989046 ~ 33990588 (+) True G26826
TU33593 lncRNA upstream 471180 33789940 ~ 33794941 (+) False AMCG00007854
TU33733 lncRNA downstream 359544 34625962 ~ 34626229 (+) True G26923
TU33743 lncRNA downstream 524338 34790756 ~ 34793855 (+) True G26933
TU33744 lncRNA downstream 527512 34793930 ~ 34794542 (+) True G26934
TU33745 lncRNA downstream 528182 34794600 ~ 34796095 (+) True G26935
TU33761 lncRNA downstream 548742 34815160 ~ 34815389 (+) True G26951
AMCG00007866 mRNA upstream 17046 34240836 ~ 34249075 (+) True AMCG00007866
AMCG00007865 mRNA upstream 40480 34222899 ~ 34225641 (+) True AMCG00007865
AMCG00007864 mRNA upstream 182800 34065131 ~ 34083321 (+) True AMCG00007864
AMCG00007863 mRNA upstream 213931 34044612 ~ 34052190 (+) True AMCG00007863
AMCG00007860 mRNA upstream 255570 34001037 ~ 34010551 (+) True AMCG00007860
AMCG00007868 mRNA downstream 5345 34271763 ~ 34325416 (+) True AMCG00007868
AMCG00007867 mRNA downstream 82069 34348487 ~ 34353634 (+) True AMCG00007867
AMCG00007870 mRNA downstream 956046 35222464 ~ 35228724 (+) True AMCG00007870
AMCG00007871 mRNA downstream 1054201 35320619 ~ 35323890 (+) True AMCG00007871
AMCG00007872 mRNA downstream 1271143 35537561 ~ 35548907 (+) True AMCG00007872
TU32939 other upstream 4491086 29765828 ~ 29775035 (+) False G26258
TU32711 other upstream 5262348 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 5811414 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 6171380 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 10071640 24192221 ~ 24194481 (+) True AMCG00007631
TU33841 other downstream 1344698 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 3878566 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 3902152 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 4089511 38355929 ~ 38412929 (+) False AMCG00007957
TU34460 other downstream 4165627 38432045 ~ 38436595 (+) True G27551

Expression Profile