RNA id: TU33762



Basic Information


Item Value
RNA id TU33762
length 227
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G26952
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 34816694 ~ 34816920 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGAAAATGCagagtgatttttcttttcagggcTATTACACTGAGTTATTTAACATCATGGTTTCAGAAAAGAGTTAATATTCAGGGCCTTTAATGGGCTACAATCTATAACAAGCATAAAAAGTAAACAGACACTCCTACTTCTCATCTGGCACCAAGTCAGTTCTTATTTAAGATAGGCAAATACAACAATGCATCTCATTAAACACTGAGATTGAAATGGAAATC

Function


GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33753 lncRNA downstream 19841 34796169 ~ 34796853 (-) True G26943
TU33700 lncRNA downstream 563129 34249199 ~ 34253565 (-) True G26893
TU33689 lncRNA downstream 593463 34189496 ~ 34223231 (-) True G26883
TU33638 lncRNA downstream 822736 33992135 ~ 33993958 (-) True G26848
TU33637 lncRNA downstream 828703 33986547 ~ 33987991 (-) True G26847
TU33805 lncRNA upstream 714010 35530930 ~ 35531438 (-) True G26994
TU33806 lncRNA upstream 720384 35537304 ~ 35537636 (-) True G26995
TU33808 lncRNA upstream 733951 35550871 ~ 35552507 (-) True G26997
TU33838 lncRNA upstream 778510 35595430 ~ 35603175 (-) True G27023
TU33928 lncRNA upstream 1186273 36003193 ~ 36005750 (-) False AMCG00007883
AMCG00007869 mRNA downstream 11816 34796895 ~ 34804878 (-) True AMCG00007869
AMCG00007861 mRNA downstream 773798 34011110 ~ 34042896 (-) True AMCG00007861
AMCG00007862 mRNA downstream 816956 33995712 ~ 33999738 (-) True AMCG00007862
AMCG00007859 mRNA downstream 878614 33922475 ~ 33938080 (-) True AMCG00007859
AMCG00007856 mRNA downstream 1002761 33800570 ~ 33813933 (-) True AMCG00007856
AMCG00007874 mRNA upstream 739330 35556250 ~ 35594137 (-) True AMCG00007874
AMCG00007875 mRNA upstream 808890 35625810 ~ 35637920 (-) True AMCG00007875
AMCG00007876 mRNA upstream 832924 35649844 ~ 35665471 (-) True AMCG00007876
AMCG00007877 mRNA upstream 901104 35718024 ~ 35735817 (-) True AMCG00007877
AMCG00007880 mRNA upstream 1023233 35840153 ~ 35852765 (-) True AMCG00007880
TU31949 other downstream 9185102 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 9551743 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 10548773 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 10844029 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 14343990 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 52515 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 2423169 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 2677991 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 2750697 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 2754037 37570957 ~ 37571488 (-) True G27439

Expression Profile