RNA id: TU34097


Basic Information

Item Value
RNA id TU34097
length 584
lncRNA type inter_gene
GC content 0.58
exon number 3
gene id G27243
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36744068 ~ 36745866 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gaTGCCACAGGCTACTTCATAGGGAGTTGTCTTCCAGGAGTGGGCCTCCACTCGCTTCCCATCAGGCAGCTCAACAGAGATGGGCCTGCTCTCTGTGGCTGCTCTCTGACTCTGAATGGCATCGCTCTCCTTCTTCAGCTCCTTGTACAGCTGCAACCGTTCCTCAATGTAATCTGGCTTTGGGTGAAGCTGTCCAGCTTCACTCCCTCCTTTCGCACTGtcctgtttcttcttcttcttgtccttCTCTGGCTTAGTGTCAGCATTGCCCtggttgttgctgctgctgctgctgctcttatCTTTCTTGTCCTTCCCTTTCTCCGGCGCTCCTGCTTCGCTTGCACTTGGCGCCGCTTTGTCCCGCTCGCACTCCGCCTGCAGGCTTCTCCGCAAGTGCACGATGCGATACCGCAGCTTCTCATTCTCGCTTCTCAAGCTTTCCAGCTCCGGGCTGCCGCCGAGGCCGGATCCGGCTATCGAGCCTCCCTCTACTACCCCGTCTCGTAGCCGGCCGACCTCCAGGGTGAGGAGACGGATCTGCTCCTCTTGAGCTGTCAAGCGTGCAGCTATGGAGTCCGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34047 lncRNA downstream 252222 36491196 ~ 36491846 (-) True G27197
TU34046 lncRNA downstream 275616 36468086 ~ 36468452 (-) True G27196
TU34020 lncRNA downstream 379613 36362471 ~ 36364455 (-) True G27173
TU33962 lncRNA downstream 594792 36102306 ~ 36149276 (-) True G27123
TU33941 lncRNA downstream 713756 36029469 ~ 36030312 (-) True G27109
TU34106 lncRNA upstream 14479 36760345 ~ 36760589 (-) True G27252
TU34108 lncRNA upstream 21787 36767653 ~ 36767939 (-) True G27254
TU34133 lncRNA upstream 97464 36843330 ~ 36843965 (-) False AMCG00007907
TU34168 lncRNA upstream 221261 36967127 ~ 36969756 (-) True G27302
TU34205 lncRNA upstream 346783 37092649 ~ 37093300 (-) True G27335
AMCG00007901 mRNA downstream 599 36730321 ~ 36743469 (-) True AMCG00007901
AMCG00007893 mRNA downstream 278633 36431147 ~ 36465435 (-) True AMCG00007893
AMCG00007890 mRNA downstream 429925 36307564 ~ 36314143 (-) True AMCG00007890
AMCG00007891 mRNA downstream 437696 36304406 ~ 36306372 (-) True AMCG00007891
AMCG00007887 mRNA downstream 476262 36179909 ~ 36267806 (-) True AMCG00007887
AMCG00007907 mRNA upstream 96609 36842475 ~ 36846583 (-) True AMCG00007907
AMCG00007908 mRNA upstream 124265 36870131 ~ 36879680 (-) True AMCG00007908
AMCG00007911 mRNA upstream 139514 36885380 ~ 36900670 (-) True AMCG00007911
AMCG00007910 mRNA upstream 190961 36936827 ~ 36941868 (-) True AMCG00007910
AMCG00007915 mRNA upstream 242797 36988663 ~ 36992974 (-) True AMCG00007915
TU33771 other downstream 1874261 34869435 ~ 34869807 (-) True G26961
TU31949 other downstream 11112476 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 11479117 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 12476147 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 12771403 23971671 ~ 23972665 (-) True G25026
TU34246 other upstream 494223 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 749045 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 821751 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 825091 37570957 ~ 37571488 (-) True G27439
TU34329 other upstream 827168 37573034 ~ 37588525 (-) True G27442

Expression Profile