RNA id: TU34322



Basic Information


Item Value
RNA id TU34322
length 215
lncRNA type inter_gene
GC content 0.70
exon number 1
gene id G27435
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37566769 ~ 37566983 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTTTCTGCATCTCCAGGAAGAGGGGGTCCGGCTCAGCCGCCCGTCTCCGTAGCTCCTCGCCCAGCTGCCAGCTGCCCCCCATGGCATCAGGCAGCAGGAAGTCGGGCCGCAGCGGCTCGCGGCGTGTGAAGCGCTGGTACGCGGTGATGAGCCGCCGGAGACGCGCAGTCAGGGCAGAGCCTGCCGGCCACAACCCCCGGCCCATCTCCACACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU34205 lncRNA downstream 473469 37092649 ~ 37093300 (-) True G27335
TU34168 lncRNA downstream 597013 36967127 ~ 36969756 (-) True G27302
TU34133 lncRNA downstream 722804 36843330 ~ 36843965 (-) False AMCG00007907
TU34108 lncRNA downstream 798830 36767653 ~ 36767939 (-) True G27254
TU34106 lncRNA downstream 806180 36760345 ~ 36760589 (-) True G27252
TU34323 lncRNA upstream 220 37567203 ~ 37567566 (-) True G27436
TU34325 lncRNA upstream 3276 37570259 ~ 37570881 (-) True G27438
TU34352 lncRNA upstream 210086 37777069 ~ 37777318 (-) True G27463
TU34386 lncRNA upstream 450247 38017230 ~ 38017469 (-) True G27491
TU34469 lncRNA upstream 872620 38439603 ~ 38439862 (-) True G27557
AMCG00007939 mRNA downstream 47646 37500784 ~ 37519123 (-) True AMCG00007939
AMCG00007941 mRNA downstream 75936 37487728 ~ 37490833 (-) True AMCG00007941
AMCG00007935 mRNA downstream 128260 37423717 ~ 37438509 (-) True AMCG00007935
AMCG00007936 mRNA downstream 161906 37404441 ~ 37404863 (-) True AMCG00007936
AMCG00007933 mRNA downstream 183174 37369911 ~ 37383595 (-) True AMCG00007933
AMCG00007943 mRNA upstream 224458 37791441 ~ 37827192 (-) True AMCG00007943
AMCG00007945 mRNA upstream 299467 37866450 ~ 37876752 (-) True AMCG00007945
AMCG00007946 mRNA upstream 345595 37912578 ~ 37916476 (-) True AMCG00007946
AMCG00007944 mRNA upstream 358288 37925271 ~ 37936478 (-) True AMCG00007944
AMCG00007953 mRNA upstream 579536 38146519 ~ 38148924 (-) True AMCG00007953
TU34303 other downstream 67377 37494911 ~ 37499392 (-) True G27416
TU34246 other downstream 323786 37240089 ~ 37242983 (-) False AMCG00007929
TU33771 other downstream 2696962 34869435 ~ 34869807 (-) True G26961
TU31949 other downstream 11935177 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 12301818 25264332 ~ 25264951 (-) True G25422
TU34324 other upstream 634 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 3974 37570957 ~ 37571488 (-) True G27439
TU34329 other upstream 6051 37573034 ~ 37588525 (-) True G27442
TU34400 other upstream 518946 38085929 ~ 38091878 (-) True G27502
TU34421 other upstream 594303 38161286 ~ 38164542 (-) True G27522