RNA id: TU34610


Basic Information

Item Value
RNA id TU34610
length 237
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G27667
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38855531 ~ 38855767 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tcaaatacattgaccgtttggatttaattttaaatgcatcggaccattttggtttgttttttatttttatcattttaattgttttttgatttgtccggtgcattttcagttattttcaatgtatttgactcttttgttggtagcattttttgctttaatcacgtttgttttattgttttgtttaagcacatgTTCATTTgagtttatatgtttatattaatcactaagattttaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34587 lncRNA upstream 20937 38792449 ~ 38834594 (+) True G27648
TU34503 lncRNA upstream 126499 38671871 ~ 38729032 (+) True G27581
TU34473 lncRNA upstream 373140 38481297 ~ 38482391 (+) True G27561
TU34465 lncRNA upstream 413460 38441536 ~ 38442071 (+) True G27553
TU34464 lncRNA upstream 415639 38439574 ~ 38439892 (+) True G27552
TU34617 lncRNA downstream 50287 38906054 ~ 38908182 (+) True G27670
TU34673 lncRNA downstream 198772 39054539 ~ 39055627 (+) True G27708
TU34674 lncRNA downstream 203764 39059531 ~ 39059734 (+) True G27709
TU34734 lncRNA downstream 350614 39206381 ~ 39208293 (+) True G27760
TU34735 lncRNA downstream 350614 39206381 ~ 39208293 (+) False G27760
AMCG00007969 mRNA upstream 70910 38768211 ~ 38784621 (+) True AMCG00007969
AMCG00007968 mRNA upstream 87947 38757856 ~ 38767584 (+) True AMCG00007968
AMCG00007971 mRNA upstream 128765 38713761 ~ 38726766 (+) True AMCG00007971
AMCG00007970 mRNA upstream 151326 38692843 ~ 38704205 (+) False AMCG00007970
AMCG00007964 mRNA upstream 194200 38636482 ~ 38661331 (+) True AMCG00007964
AMCG00007979 mRNA downstream 5760 38861527 ~ 38898891 (+) True AMCG00007979
AMCG00007981 mRNA downstream 44561 38900328 ~ 38904511 (+) True AMCG00007981
AMCG00007978 mRNA downstream 53518 38909285 ~ 38917976 (+) True AMCG00007978
AMCG00007980 mRNA downstream 65269 38921036 ~ 38925671 (+) True AMCG00007980
AMCG00007986 mRNA downstream 148234 39004001 ~ 39012851 (+) True AMCG00007986
TU34527 other upstream 146616 38692739 ~ 38708915 (+) True AMCG00007970
TU34460 other upstream 418936 38432045 ~ 38436595 (+) True G27551
TU34447 other upstream 442602 38355929 ~ 38412929 (+) False AMCG00007957
TU34423 other upstream 685470 38168570 ~ 38170061 (+) False AMCG00007952
TU34416 other upstream 708681 38144984 ~ 38146850 (+) True G27518
TU34851 other downstream 647312 39503079 ~ 39504377 (+) True G27847
TU34945 other downstream 976622 39832389 ~ 39834936 (+) False AMCG00008020
TU35023 other downstream 1200865 40056632 ~ 40059386 (+) True G27974
TU35066 other downstream 1385545 40241312 ~ 40247238 (+) True AMCG00008036
TU35555 other downstream 3137092 41992859 ~ 41993377 (+) True G28395

Expression Profile