RNA id: TU35311


Basic Information

Item Value
RNA id TU35311
length 352
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G28206
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41043696 ~ 41044047 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaagtatttgatcccctgctgattttgtacgtttgtccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacaacaaaaaaatccagaaaaacttatttcaaaaaagttatacattgatttgcatgttaatgagggaaataagtatttgaccccttcgacttagtacttggtggcaaaatccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35308 lncRNA downstream 24274 41018244 ~ 41019422 (-) True G28203
TU35294 lncRNA downstream 58792 40983619 ~ 40984904 (-) True G28190
TU35228 lncRNA downstream 293253 40748306 ~ 40750443 (-) True G28139
TU35203 lncRNA downstream 375834 40663917 ~ 40667862 (-) True G28119
TU35192 lncRNA downstream 379936 40659881 ~ 40663760 (-) True G28110
TU35353 lncRNA upstream 85091 41129138 ~ 41129628 (-) True G28241
TU35434 lncRNA upstream 316097 41360144 ~ 41360468 (-) True G28308
TU35435 lncRNA upstream 320715 41364762 ~ 41366616 (-) True G28309
TU35443 lncRNA upstream 361744 41405791 ~ 41412224 (-) True AMCG00008076
TU35456 lncRNA upstream 583314 41627361 ~ 41627752 (-) True G28325
AMCG00008058 mRNA downstream 61006 40981896 ~ 40982690 (-) True AMCG00008058
AMCG00008053 mRNA downstream 168259 40868653 ~ 40875437 (-) True AMCG00008053
AMCG00008056 mRNA downstream 194947 40847002 ~ 40848749 (-) True AMCG00008056
AMCG00008054 mRNA downstream 215180 40819849 ~ 40828516 (-) True AMCG00008054
AMCG00008055 mRNA downstream 274372 40755783 ~ 40769324 (-) True AMCG00008055
AMCG00008063 mRNA upstream 12079 41056126 ~ 41078139 (-) True AMCG00008063
AMCG00008066 mRNA upstream 42901 41086948 ~ 41095005 (-) True AMCG00008066
AMCG00008068 mRNA upstream 84869 41128916 ~ 41189631 (-) True AMCG00008068
AMCG00008069 mRNA upstream 155577 41199624 ~ 41201818 (-) False AMCG00008069
AMCG00008067 mRNA upstream 158861 41202908 ~ 41219672 (-) True AMCG00008067
TU35307 other downstream 26448 41016159 ~ 41017248 (-) True G28202
TU34865 other downstream 1539104 39500321 ~ 39504592 (-) True G27861
TU34691 other downstream 1951941 39088922 ~ 39091755 (-) False AMCG00007993
TU34686 other downstream 1988017 39054153 ~ 39055679 (-) True G27720
TU34684 other downstream 1994099 39047289 ~ 39049597 (-) False AMCG00007990
TU35381 other upstream 155442 41199489 ~ 41201825 (-) True AMCG00008069
TU35536 other upstream 802886 41846933 ~ 41849890 (-) True AMCG00008085
TU35782 other upstream 1716957 42761004 ~ 42764654 (-) True G28581
TU36269 other upstream 3373827 44417874 ~ 44418196 (-) True G28970
TU36715 other upstream 5006648 46050695 ~ 46054346 (-) True G29301

Expression Profile