RNA id: TU35460


Basic Information

Item Value
RNA id TU35460
length 222
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G28329
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41728212 ~ 41728433 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cttcttcagaaGAGCTTGGAcggcacatctggaaacccctgtctgccttgaactGTCTGcttgggagagaccttgctgatgcagtagaactacctcgtgtcttgttgctgtgctcagtcttgccatggtgtatgacttttgacagtaaactgtcttcagcaacctcaccttgttagctgagtttggctgttcctcacccagttttattcctcctacacagct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35458 lncRNA upstream 32504 41695354 ~ 41695708 (+) True G28327
TU35429 lncRNA upstream 339428 41388583 ~ 41388784 (+) True G28303
TU35427 lncRNA upstream 349919 41378051 ~ 41378293 (+) True G28301
TU35426 lncRNA upstream 356391 41370866 ~ 41371821 (+) True G28300
TU35425 lncRNA upstream 359572 41366726 ~ 41368640 (+) True G28299
TU35467 lncRNA downstream 118559 41846992 ~ 41849950 (+) False G28332
TU35472 lncRNA downstream 118559 41846992 ~ 41865026 (+) False G28332
TU35471 lncRNA downstream 197412 41925845 ~ 41936214 (+) True G28332
TU35554 lncRNA downstream 248826 41977259 ~ 41980084 (+) True G28394
TU35585 lncRNA downstream 378434 42106867 ~ 42110075 (+) True G28416
AMCG00008077 mRNA upstream 165023 41558420 ~ 41563189 (+) True AMCG00008077
AMCG00008070 mRNA upstream 371379 41350428 ~ 41356833 (+) True AMCG00008070
AMCG00008065 mRNA upstream 599338 41123903 ~ 41128874 (+) True AMCG00008065
AMCG00008064 mRNA upstream 609252 41111056 ~ 41118960 (+) True AMCG00008064
AMCG00008060 mRNA upstream 714339 40993721 ~ 41013873 (+) True AMCG00008060
AMCG00008081 mRNA downstream 41517 41769950 ~ 41789678 (+) True AMCG00008081
AMCG00008080 mRNA downstream 71816 41800249 ~ 41812742 (+) True AMCG00008080
AMCG00008083 mRNA downstream 93235 41821668 ~ 41821994 (+) True AMCG00008083
AMCG00008084 mRNA downstream 98307 41826740 ~ 41832892 (+) True AMCG00008084
AMCG00008082 mRNA downstream 104829 41833262 ~ 41846010 (+) True AMCG00008082
TU35066 other upstream 1480974 40241312 ~ 40247238 (+) True AMCG00008036
TU35023 other upstream 1668826 40056632 ~ 40059386 (+) True G27974
TU34945 other upstream 1893276 39832389 ~ 39834936 (+) False AMCG00008020
TU34851 other upstream 2223835 39503079 ~ 39504377 (+) True G27847
TU34527 other upstream 3019297 38692739 ~ 38708915 (+) True AMCG00007970
TU35555 other downstream 264426 41992859 ~ 41993377 (+) True G28395
TU35844 other downstream 1377280 43105713 ~ 43108242 (+) True G28636
TU35886 other downstream 1418340 43146773 ~ 43149043 (+) False AMCG00008120
TU35919 other downstream 1564163 43292596 ~ 43301422 (+) False AMCG00008132
TU36366 other downstream 3294715 45023148 ~ 45036416 (+) True AMCG00008177

Expression Profile