RNA id: TU36226


Basic Information

Item Value
RNA id TU36226
length 331
lncRNA type inter_gene
GC content 0.59
exon number 7
gene id G28931
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44053965 ~ 44056608 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTCGGCCCAGCTTCTCCCCTCTCTCCGGGAACACCCTGAACGCCTGGAATACCTGGCTCTCCAGACGGGCCGGGCTCTCCACTTTTTCCTTGGTCACCACTCTGCCCTTTCGATCCTTTGGTTCCAGCCTTTCCTTGTAATCCAGGAAGGCCATTGGGACCTTTCTCCCCTGGGACTCCAGGTCGCCCGGCATCCCCTTTCTCTCCGTCTGTTCCCGGAGTCCCATCTTTTCCATCCCGACCAGGAATGCCTGGCTCTCCTTTAGGCCCAGATCCCCCTGGCACTCCTTTCGGACCTGGTTTTCCAATGTCACCCTTTGGTCCTTTGAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36139 lncRNA upstream 158014 43894109 ~ 43895951 (+) True G28862
TU36138 lncRNA upstream 158014 43894185 ~ 43895951 (+) False G28862
TU36140 lncRNA upstream 158837 43894185 ~ 43895128 (+) False G28862
TU35900 lncRNA upstream 852762 43177802 ~ 43201203 (+) True G28678
TU35847 lncRNA upstream 933184 43109050 ~ 43120781 (+) True G28637
TU36252 lncRNA downstream 634933 44691541 ~ 44749908 (+) True G28956
TU36298 lncRNA downstream 712069 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA downstream 739316 44795924 ~ 44798463 (+) True G28995
TU36485 lncRNA downstream 1297108 45353716 ~ 45354079 (+) True G29148
TU36491 lncRNA downstream 1321403 45378011 ~ 45378353 (+) True G29153
AMCG00008153 mRNA upstream 9155 44040778 ~ 44044810 (+) True AMCG00008153
AMCG00008156 mRNA upstream 17838 44034386 ~ 44036127 (+) True AMCG00008156
AMCG00008155 mRNA upstream 19625 44001734 ~ 44034340 (+) True AMCG00008155
AMCG00008154 mRNA upstream 54132 43976301 ~ 43999833 (+) True AMCG00008154
AMCG00008149 mRNA upstream 160867 43854025 ~ 43893098 (+) True AMCG00008149
AMCG00008157 mRNA downstream 49847 44106455 ~ 44131719 (+) True AMCG00008157
AMCG00008160 mRNA downstream 203367 44259975 ~ 44268323 (+) True AMCG00008160
AMCG00008167 mRNA downstream 520764 44577372 ~ 44653905 (+) True AMCG00008167
AMCG00008162 mRNA downstream 609028 44665636 ~ 44683700 (+) True AMCG00008162
AMCG00008161 mRNA downstream 687022 44743630 ~ 44748571 (+) True AMCG00008161
TU35919 other upstream 752543 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 904922 43146773 ~ 43149043 (+) False AMCG00008120
TU35844 other upstream 945723 43105713 ~ 43108242 (+) True G28636
TU35555 other upstream 2060588 41992859 ~ 41993377 (+) True G28395
TU35066 other upstream 3806727 40241312 ~ 40247238 (+) True AMCG00008036
TU36366 other downstream 966540 45023148 ~ 45036416 (+) True AMCG00008177
TU36420 other downstream 1092821 45149429 ~ 45171828 (+) True AMCG00008185
TU36476 other downstream 1283988 45340596 ~ 45343914 (+) False AMCG00008194
TU36524 other downstream 1383905 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 2211283 46267891 ~ 46268327 (+) True G29353

Expression Profile