RNA id: TU36269


Basic Information

Item Value
RNA id TU36269
length 323
RNA type TUCP
GC content 0.49
exon number 1
gene id G28970
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44417874 ~ 44418196 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gagctgagattaggagcactctcttaaagggagtgctcctaatctcagctcgttacctgcataaaagacacctgtccacagaagcaatcaatcaatcagagtcaaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgctaagcagcttggtgagaaggtgacaacagttggtgggATTATTCGCAAacggaagaaacacaaaattacTGTCAGtgtccctcggtctggggctccatgcaagatctcaccccGTGGAGTT

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36208 lncRNA downstream 417008 43996118 ~ 44000866 (-) True G28914
TU36196 lncRNA downstream 521923 43894179 ~ 43895951 (-) True G28907
TU36187 lncRNA downstream 524066 43863607 ~ 43893808 (-) True G28900
TU36079 lncRNA downstream 834461 43510760 ~ 43583413 (-) False AMCG00008144
TU35870 lncRNA downstream 1319401 43097198 ~ 43098473 (-) False AMCG00008124
TU36272 lncRNA upstream 69014 44487210 ~ 44487419 (-) True G28973
TU36273 lncRNA upstream 248147 44666343 ~ 44666577 (-) True G28974
TU36277 lncRNA upstream 261620 44679816 ~ 44680042 (-) True G28977
TU36278 lncRNA upstream 263229 44681425 ~ 44681769 (-) True G28978
TU36275 lncRNA upstream 264241 44682437 ~ 44688175 (-) True G28976
AMCG00008158 mRNA downstream 335026 44073663 ~ 44082848 (-) True AMCG00008158
AMCG00008159 mRNA downstream 345889 44044933 ~ 44071985 (-) True AMCG00008159
AMCG00008151 mRNA downstream 445574 43962078 ~ 43972300 (-) True AMCG00008151
AMCG00008152 mRNA downstream 495846 43897216 ~ 43922028 (-) True AMCG00008152
AMCG00008148 mRNA downstream 741497 43666568 ~ 43676377 (-) True AMCG00008148
AMCG00008164 mRNA upstream 303543 44721739 ~ 44740915 (-) True AMCG00008164
AMCG00008165 mRNA upstream 330894 44749090 ~ 44752458 (-) True AMCG00008165
AMCG00008163 mRNA upstream 358457 44776653 ~ 44778533 (-) True AMCG00008163
AMCG00008166 mRNA upstream 360540 44778736 ~ 44786186 (-) True AMCG00008166
AMCG00008174 mRNA upstream 377730 44795926 ~ 44814080 (-) True AMCG00008174
TU35782 other downstream 1653220 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 2567984 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 3216049 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 3400626 41016159 ~ 41017248 (-) True G28202
TU34865 other downstream 4913282 39500321 ~ 39504592 (-) True G27861
TU36715 other upstream 1632499 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 2062750 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 3295738 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 3705729 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 3863146 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile