RNA id: TU36272


Basic Information

Item Value
RNA id TU36272
length 210
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G28973
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44487210 ~ 44487419 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aagtcagggattttgtaggcatatagtcaggtgtatgattaaacaattataccaaaaaggtgctaatgatcatcaattcaatatgtaggttgaaacacaatcattaactgaaacagaaacagctgtgtaggaggaataaaactgggtgaggaacaaccaaactcagctaacaaggtgaggttgctgaagacagtttactgtcaaaagtca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36208 lncRNA downstream 486344 43996118 ~ 44000866 (-) True G28914
TU36196 lncRNA downstream 591259 43894179 ~ 43895951 (-) True G28907
TU36187 lncRNA downstream 593402 43863607 ~ 43893808 (-) True G28900
TU36079 lncRNA downstream 903797 43510760 ~ 43583413 (-) False AMCG00008144
TU35870 lncRNA downstream 1388737 43097198 ~ 43098473 (-) False AMCG00008124
TU36273 lncRNA upstream 178924 44666343 ~ 44666577 (-) True G28974
TU36277 lncRNA upstream 192397 44679816 ~ 44680042 (-) True G28977
TU36278 lncRNA upstream 194006 44681425 ~ 44681769 (-) True G28978
TU36275 lncRNA upstream 195018 44682437 ~ 44688175 (-) True G28976
TU36401 lncRNA upstream 547026 45034445 ~ 45036413 (-) True G29081
AMCG00008158 mRNA downstream 404362 44073663 ~ 44082848 (-) True AMCG00008158
AMCG00008159 mRNA downstream 415225 44044933 ~ 44071985 (-) True AMCG00008159
AMCG00008151 mRNA downstream 514910 43962078 ~ 43972300 (-) True AMCG00008151
AMCG00008152 mRNA downstream 565182 43897216 ~ 43922028 (-) True AMCG00008152
AMCG00008148 mRNA downstream 810833 43666568 ~ 43676377 (-) True AMCG00008148
AMCG00008164 mRNA upstream 234320 44721739 ~ 44740915 (-) True AMCG00008164
AMCG00008165 mRNA upstream 261671 44749090 ~ 44752458 (-) True AMCG00008165
AMCG00008163 mRNA upstream 289234 44776653 ~ 44778533 (-) True AMCG00008163
AMCG00008166 mRNA upstream 291317 44778736 ~ 44786186 (-) True AMCG00008166
AMCG00008174 mRNA upstream 308507 44795926 ~ 44814080 (-) True AMCG00008174
TU36269 other downstream 69014 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 1722556 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 2637320 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 3285385 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 3469962 41016159 ~ 41017248 (-) True G28202
TU36715 other upstream 1563276 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 1993527 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 3226515 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 3636506 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 3793923 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile