RNA id: TU36273


Basic Information

Item Value
RNA id TU36273
length 235
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G28974
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44666343 ~ 44666577 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCTGCATGAAGCGGTCGGGGTCGTTGGCGGCGAACGTGGAAAGGGTGGTGCCAGCGGGGACGCCCTCCTCAAAGCGAATGAGTTTGGGGTTGGCGGGGAAGAAAGGCGCCTCGTTCACGTCCATGACCGAGATGGTGACCCCTGCTGTGGACTGGAAGGAGGACTGAATACCGTTGGCAAGAGGAGCCTGATTGGACACGATCACGGTTAACATGAAGGCGCGGTTCATCTCGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36272 lncRNA downstream 178924 44487210 ~ 44487419 (-) True G28973
TU36208 lncRNA downstream 665477 43996118 ~ 44000866 (-) True G28914
TU36196 lncRNA downstream 770392 43894179 ~ 43895951 (-) True G28907
TU36187 lncRNA downstream 772535 43863607 ~ 43893808 (-) True G28900
TU36079 lncRNA downstream 1082930 43510760 ~ 43583413 (-) False AMCG00008144
TU36277 lncRNA upstream 13239 44679816 ~ 44680042 (-) True G28977
TU36278 lncRNA upstream 14848 44681425 ~ 44681769 (-) True G28978
TU36275 lncRNA upstream 15860 44682437 ~ 44688175 (-) True G28976
TU36401 lncRNA upstream 367868 45034445 ~ 45036413 (-) True G29081
TU36439 lncRNA upstream 482924 45149501 ~ 45151327 (-) False AMCG00008192
AMCG00008158 mRNA downstream 583495 44073663 ~ 44082848 (-) True AMCG00008158
AMCG00008159 mRNA downstream 594358 44044933 ~ 44071985 (-) True AMCG00008159
AMCG00008151 mRNA downstream 694043 43962078 ~ 43972300 (-) True AMCG00008151
AMCG00008152 mRNA downstream 744315 43897216 ~ 43922028 (-) True AMCG00008152
AMCG00008148 mRNA downstream 989966 43666568 ~ 43676377 (-) True AMCG00008148
AMCG00008164 mRNA upstream 55162 44721739 ~ 44740915 (-) True AMCG00008164
AMCG00008165 mRNA upstream 82513 44749090 ~ 44752458 (-) True AMCG00008165
AMCG00008163 mRNA upstream 110076 44776653 ~ 44778533 (-) True AMCG00008163
AMCG00008166 mRNA upstream 112159 44778736 ~ 44786186 (-) True AMCG00008166
AMCG00008174 mRNA upstream 129349 44795926 ~ 44814080 (-) True AMCG00008174
TU36269 other downstream 248147 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 1901689 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 2816453 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 3464518 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 3649095 41016159 ~ 41017248 (-) True G28202
TU36715 other upstream 1384118 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 1814369 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 3047357 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 3457348 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 3614765 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile