RNA id: TU36485



Basic Information


Item Value
RNA id TU36485
length 364
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G29148
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45353716 ~ 45354079 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacaacaaaaaaatccagaaaaacacatttcaaaaaagttatacattgatttgcatgttaatgagggaaataagtatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttgtccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggcaactcgaaccctcagctccctccacagattttctatgggattaaggtctggaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36298 lncRNA upstream 537053 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA upstream 555253 44795924 ~ 44798463 (+) True G28995
TU36252 lncRNA upstream 603808 44691541 ~ 44749908 (+) True G28956
TU36226 lncRNA upstream 1297108 44053965 ~ 44056608 (+) True G28931
TU36139 lncRNA upstream 1457765 43894109 ~ 43895951 (+) True G28862
TU36491 lncRNA downstream 23932 45378011 ~ 45378353 (+) True G29153
TU36579 lncRNA downstream 185690 45539769 ~ 45542206 (+) True G29223
TU36682 lncRNA downstream 371904 45725983 ~ 45734261 (+) True G29271
TU36703 lncRNA downstream 533870 45887949 ~ 45888412 (+) True G29291
TU36736 lncRNA downstream 738829 46092908 ~ 46093489 (+) True G29320
AMCG00008194 mRNA upstream 9851 45340574 ~ 45343865 (+) True AMCG00008194
AMCG00008193 mRNA upstream 17462 45328163 ~ 45336254 (+) True AMCG00008193
AMCG00008187 mRNA upstream 83884 45245953 ~ 45269832 (+) True AMCG00008187
AMCG00008186 mRNA upstream 111364 45239938 ~ 45242352 (+) True AMCG00008186
AMCG00008188 mRNA upstream 121015 45228642 ~ 45232701 (+) True AMCG00008188
AMCG00008199 mRNA downstream 21886 45375965 ~ 45399868 (+) True AMCG00008199
AMCG00008200 mRNA downstream 46790 45400869 ~ 45408463 (+) True AMCG00008200
AMCG00008204 mRNA downstream 62198 45416277 ~ 45423427 (+) True AMCG00008204
AMCG00008205 mRNA downstream 89859 45443938 ~ 45468459 (+) True AMCG00008205
AMCG00008198 mRNA downstream 130551 45484630 ~ 45486967 (+) True AMCG00008198
TU36476 other upstream 9802 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 181888 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 317300 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2052294 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 2204673 43146773 ~ 43149043 (+) False AMCG00008120
TU36524 other downstream 86434 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 913812 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 2226134 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 2241025 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 2273217 47627296 ~ 47671421 (+) False AMCG00008232

Expression Profile