RNA id: TU36524



Basic Information


Item Value
RNA id TU36524
length 552
RNA type TUCP
GC content 0.38
exon number 1
gene id G29183
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45440513 ~ 45441064 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


caggactgcatgtagcaaggatgtggctgttataatgggggatttcaatttcccaaacatagactgggaaagcccggttgggactacagaagcagaaatagaaatggttgagatggtaaatgactgctttctaactcaatttgtcagggaaccaaccagggagagtgcatgtattgacttgatcttttcaaatgaccaagatagagtcagggggacagtagttagagaaccaattgcaaattgtgatcacaatatggttaggcattctttcaaaaaaacaaggcccaagtctaaaacaatggtctataatttcagaaaagcaaaccttgaaggtatgaggtggcacttagaagaggtagactggagcacattggatacagagtcagttgaaaatggatgggtatattttaagaatatactacttgaggctcaggagaaatttgtaccaaaatttAGAAAAGTGAgcaccaaaaaacagtggccaaaatgttttaatagaggtatgcaaaaaaatatcaaggggaagaaaatgttgtatagtgcatacaaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36491 lncRNA upstream 62160 45378011 ~ 45378353 (+) True G29153
TU36485 lncRNA upstream 86434 45353716 ~ 45354079 (+) True G29148
TU36298 lncRNA upstream 623850 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA upstream 642050 44795924 ~ 44798463 (+) True G28995
TU36252 lncRNA upstream 690605 44691541 ~ 44749908 (+) True G28956
TU36579 lncRNA downstream 98705 45539769 ~ 45542206 (+) True G29223
TU36682 lncRNA downstream 284919 45725983 ~ 45734261 (+) True G29271
TU36703 lncRNA downstream 446885 45887949 ~ 45888412 (+) True G29291
TU36736 lncRNA downstream 651844 46092908 ~ 46093489 (+) True G29320
TU36779 lncRNA downstream 827611 46268675 ~ 46268989 (+) True G29355
AMCG00008204 mRNA upstream 17086 45416277 ~ 45423427 (+) True AMCG00008204
AMCG00008200 mRNA upstream 32050 45400869 ~ 45408463 (+) True AMCG00008200
AMCG00008199 mRNA upstream 40645 45375965 ~ 45399868 (+) True AMCG00008199
AMCG00008194 mRNA upstream 96648 45340574 ~ 45343865 (+) True AMCG00008194
AMCG00008193 mRNA upstream 104259 45328163 ~ 45336254 (+) True AMCG00008193
AMCG00008205 mRNA downstream 2874 45443938 ~ 45468459 (+) True AMCG00008205
AMCG00008198 mRNA downstream 43566 45484630 ~ 45486967 (+) True AMCG00008198
AMCG00008210 mRNA downstream 47568 45488632 ~ 45488966 (+) True AMCG00008210
AMCG00008211 mRNA downstream 158136 45599200 ~ 45638789 (+) True AMCG00008211
AMCG00008212 mRNA downstream 267504 45708568 ~ 45714043 (+) True AMCG00008212
TU36476 other upstream 96599 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 268685 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 404097 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2139091 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 2291470 43146773 ~ 43149043 (+) False AMCG00008120
TU36777 other downstream 826827 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 2139149 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 2154040 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 2186232 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 2191126 47632190 ~ 47637376 (+) True AMCG00008232

Expression Profile