RNA id: TU36696


Basic Information

Item Value
RNA id TU36696
length 274
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G29284
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45793678 ~ 45793951 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gggctccatacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgagggaactgaaccttttcaccctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaggacatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36650 lncRNA downstream 79641 45599559 ~ 45714037 (-) True G29249
TU36651 lncRNA downstream 79641 45668901 ~ 45714037 (-) False G29249
TU36654 lncRNA downstream 79641 45686238 ~ 45714037 (-) False G29249
TU36551 lncRNA downstream 302788 45490007 ~ 45490890 (-) True G29206
TU36533 lncRNA downstream 331148 45461779 ~ 45462530 (-) True G29192
TU36706 lncRNA upstream 185309 45979260 ~ 45979468 (-) True G29294
TU36772 lncRNA upstream 456712 46250663 ~ 46251181 (-) True G29348
TU36778 lncRNA upstream 473942 46267893 ~ 46268278 (-) True G29354
TU36803 lncRNA upstream 862283 46656234 ~ 46656566 (-) True G29375
TU36805 lncRNA upstream 929682 46723633 ~ 46723895 (-) True G29377
AMCG00008216 mRNA downstream 6697 45777462 ~ 45786981 (-) True AMCG00008216
AMCG00008214 mRNA downstream 32896 45737488 ~ 45760782 (-) True AMCG00008214
AMCG00008213 mRNA downstream 69251 45717392 ~ 45724427 (-) True AMCG00008213
AMCG00008215 mRNA downstream 131331 45645248 ~ 45662347 (-) True AMCG00008215
AMCG00008217 mRNA downstream 151875 45640286 ~ 45641803 (-) True AMCG00008217
AMCG00008222 mRNA upstream 317985 46111936 ~ 46123767 (-) True AMCG00008222
AMCG00008223 mRNA upstream 343797 46137748 ~ 46150163 (-) True AMCG00008223
AMCG00008224 mRNA upstream 406841 46200792 ~ 46234987 (-) True AMCG00008224
AMCG00008225 mRNA upstream 441052 46235003 ~ 46238529 (-) True AMCG00008225
AMCG00008228 mRNA upstream 953242 46747193 ~ 46747558 (-) True AMCG00008228
TU36269 other downstream 1375482 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 3029024 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 3943788 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 4591853 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 4776430 41016159 ~ 41017248 (-) True G28202
TU36715 other upstream 256744 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 686995 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 1919983 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 2329974 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 2487391 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile