RNA id: TU36736



Basic Information


Item Value
RNA id TU36736
length 582
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G29320
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46092908 ~ 46093489 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AATGGAcagattacaaatattttattatgtgatgGCTGTTTTTTATGTGCTATAGCTCAATCCTTACAGGCTTTGGACTACAAACCTGAAATCAAACctgtacatttaaacatgatAACAAACGTACAGGTGGAAATACTGAGAAATCACTCAGCTTAAATTCATGAGCTCTTCTAACTGTCCTCAACTGCTGCTGGTAATCTGGGATAATAAGTAGGAGGAGGCACtctgttttaaatcaataacatgCCCATCAATAGGCTTTTCTTGACCAGCATTGTAAAAAGAGACGTTGTGCTAGGTGGGATGAATTCATGGAAAATACagtagttgtgtttttgttagtcTAACAATTAAGACTGTACAAGaggtttgaattatttttaaatctgtattattgCAAGGAACTATACACACCTAAAACACAATCTAGGGTATCAAATGAAGCTTTGAGAGGACTTGATTGCCCTTTAATCTGGCTGATTTTCTCTGTATGCAGTTGAGGTTTCCCCTGTTTTCAGAGCCTCCTGTTTTCCTTCAACaacaagaggaaaaaagaacaataaagtTAACGTTGTTGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36703 lncRNA upstream 204496 45887949 ~ 45888412 (+) True G29291
TU36682 lncRNA upstream 358647 45725983 ~ 45734261 (+) True G29271
TU36579 lncRNA upstream 550702 45539769 ~ 45542206 (+) True G29223
TU36491 lncRNA upstream 714555 45378011 ~ 45378353 (+) True G29153
TU36485 lncRNA upstream 738829 45353716 ~ 45354079 (+) True G29148
TU36779 lncRNA downstream 175186 46268675 ~ 46268989 (+) True G29355
TU36782 lncRNA downstream 385003 46478492 ~ 46478774 (+) True G29358
TU36795 lncRNA downstream 416895 46510384 ~ 46531909 (+) True G29368
TU36800 lncRNA downstream 441478 46534967 ~ 46535184 (+) True G29372
TU36804 lncRNA downstream 630144 46723633 ~ 46723895 (+) True G29376
AMCG00008220 mRNA upstream 1915 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 24090 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 181301 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008212 mRNA upstream 378865 45708568 ~ 45714043 (+) True AMCG00008212
AMCG00008211 mRNA upstream 454119 45599200 ~ 45638789 (+) True AMCG00008211
AMCG00008221 mRNA downstream 30641 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008226 mRNA downstream 436961 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008232 mRNA downstream 1529463 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 1620844 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 1707609 47801098 ~ 47813090 (+) True AMCG00008239
TU36524 other upstream 651844 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 748994 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 921080 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 1056492 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2791486 43292596 ~ 43301422 (+) False AMCG00008132
TU36777 other downstream 174402 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 1486724 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1501615 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1533807 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1538701 47632190 ~ 47637376 (+) True AMCG00008232

Expression Profile