RNA id: TU36777



Basic Information


Item Value
RNA id TU36777
length 437
RNA type TUCP
GC content 0.55
exon number 1
gene id G29353
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46267891 ~ 46268327 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttctacgctgatgatgcccagatcttcctgtcttttccctcttctgaccctctcatcccctcacgcatctcttcctgcttgtctgccatttccgcctggatgcactcgcaccacctcaagctcaacctctccaaatcagatctcctctttttcccccactcttcctcaccttctgctgacctccccatctcgatccccttggaatccaccacactctctccttcttcttccgctaaaaatctaggagtcaccctcgatcctgcgctctcctactcccagcacatcaccacgctgatgcgcacctgcagattcttcctgagcaacatacaccggaTCCATCCCtttctcaccgactactcaactcagctactcgtccagtcactggtcctctcccgcctggactactgcaactccctcctggctggcctgcctgcatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36736 lncRNA upstream 174402 46092908 ~ 46093489 (+) True G29320
TU36703 lncRNA upstream 379479 45887949 ~ 45888412 (+) True G29291
TU36682 lncRNA upstream 533630 45725983 ~ 45734261 (+) True G29271
TU36579 lncRNA upstream 725685 45539769 ~ 45542206 (+) True G29223
TU36491 lncRNA upstream 889538 45378011 ~ 45378353 (+) True G29153
TU36779 lncRNA downstream 348 46268675 ~ 46268989 (+) True G29355
TU36782 lncRNA downstream 210165 46478492 ~ 46478774 (+) True G29358
TU36795 lncRNA downstream 242057 46510384 ~ 46531909 (+) True G29368
TU36800 lncRNA downstream 266640 46534967 ~ 46535184 (+) True G29372
TU36804 lncRNA downstream 455306 46723633 ~ 46723895 (+) True G29376
AMCG00008221 mRNA upstream 136874 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008220 mRNA upstream 176898 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 199073 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 356284 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008212 mRNA upstream 553848 45708568 ~ 45714043 (+) True AMCG00008212
AMCG00008226 mRNA downstream 262123 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008232 mRNA downstream 1354625 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 1446006 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 1532771 47801098 ~ 47813090 (+) True AMCG00008239
AMCG00008242 mRNA downstream 1621655 47889982 ~ 47892071 (+) True AMCG00008242
TU36524 other upstream 826827 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 923977 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 1096063 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 1231475 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2966469 43292596 ~ 43301422 (+) False AMCG00008132
TU36848 other downstream 1311886 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1326777 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1358969 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1363863 47632190 ~ 47637376 (+) True AMCG00008232
TU36882 other downstream 1396190 47664517 ~ 47715537 (+) False AMCG00008238

Expression Profile