RNA id: TU36782



Basic Information


Item Value
RNA id TU36782
length 283
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G29358
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46478492 ~ 46478774 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaaaaacataacaaccaaaaaacccaaacaactagtgcttttaaaatcaactaaatctttaaaaacagttaaaattcattttttaaaagtcattttttaaaaacaatcttttcataaaaatggttaaaagatcttggactcgggctccagcagggggagatggccgtccccggagatgggtcccatcacgggatcctgagctcccccagatcttgtatttgccagttcttaaaggcttcctccttgcccctctgatggacctccagattgacatagtcccta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36779 lncRNA upstream 209503 46268675 ~ 46268989 (+) True G29355
TU36736 lncRNA upstream 385003 46092908 ~ 46093489 (+) True G29320
TU36703 lncRNA upstream 590080 45887949 ~ 45888412 (+) True G29291
TU36682 lncRNA upstream 744231 45725983 ~ 45734261 (+) True G29271
TU36579 lncRNA upstream 936286 45539769 ~ 45542206 (+) True G29223
TU36795 lncRNA downstream 31610 46510384 ~ 46531909 (+) True G29368
TU36800 lncRNA downstream 56193 46534967 ~ 46535184 (+) True G29372
TU36804 lncRNA downstream 244859 46723633 ~ 46723895 (+) True G29376
TU36815 lncRNA downstream 559690 47038464 ~ 47038892 (+) True G29387
TU36833 lncRNA downstream 933585 47412359 ~ 47412566 (+) True G29404
AMCG00008221 mRNA upstream 347475 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008220 mRNA upstream 387499 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 409674 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 566885 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008212 mRNA upstream 764449 45708568 ~ 45714043 (+) True AMCG00008212
AMCG00008226 mRNA downstream 51676 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008232 mRNA downstream 1144178 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 1235559 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 1322324 47801098 ~ 47813090 (+) True AMCG00008239
AMCG00008242 mRNA downstream 1411208 47889982 ~ 47892071 (+) True AMCG00008242
TU36777 other upstream 210165 46267891 ~ 46268327 (+) True G29353
TU36524 other upstream 1037428 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 1134578 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 1306664 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 1442076 45023148 ~ 45036416 (+) True AMCG00008177
TU36848 other downstream 1101439 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1116330 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1148522 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1153416 47632190 ~ 47637376 (+) True AMCG00008232
TU36882 other downstream 1185743 47664517 ~ 47715537 (+) False AMCG00008238

Expression Profile