RNA id: TU36800


Basic Information

Item Value
RNA id TU36800
length 218
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G29372
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46534967 ~ 46535184 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aatccctcctgagatgtgtgcaaacctggtggccaactacaagaaatgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctacca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36795 lncRNA upstream 3058 46510384 ~ 46531909 (+) True G29368
TU36782 lncRNA upstream 56193 46478492 ~ 46478774 (+) True G29358
TU36779 lncRNA upstream 265978 46268675 ~ 46268989 (+) True G29355
TU36736 lncRNA upstream 441478 46092908 ~ 46093489 (+) True G29320
TU36703 lncRNA upstream 646555 45887949 ~ 45888412 (+) True G29291
TU36804 lncRNA downstream 188449 46723633 ~ 46723895 (+) True G29376
TU36815 lncRNA downstream 503280 47038464 ~ 47038892 (+) True G29387
TU36833 lncRNA downstream 877175 47412359 ~ 47412566 (+) True G29404
TU36841 lncRNA downstream 1030157 47565341 ~ 47565553 (+) True G29412
TU36847 lncRNA downstream 1042492 47577676 ~ 47578641 (+) True G29417
AMCG00008226 mRNA upstream 4209 46530450 ~ 46530758 (+) True AMCG00008226
AMCG00008221 mRNA upstream 403950 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008220 mRNA upstream 443974 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 466149 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 623360 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008232 mRNA downstream 1087768 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 1179149 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 1265914 47801098 ~ 47813090 (+) True AMCG00008239
AMCG00008242 mRNA downstream 1354798 47889982 ~ 47892071 (+) True AMCG00008242
AMCG00008243 mRNA downstream 1360734 47895918 ~ 47908312 (+) True AMCG00008243
TU36777 other upstream 266640 46267891 ~ 46268327 (+) True G29353
TU36524 other upstream 1093903 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 1191053 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 1363139 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 1498551 45023148 ~ 45036416 (+) True AMCG00008177
TU36848 other downstream 1045029 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1059920 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1092112 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1097006 47632190 ~ 47637376 (+) True AMCG00008232
TU36882 other downstream 1129333 47664517 ~ 47715537 (+) False AMCG00008238

Expression Profile