RNA id: TU36803


Basic Information

Item Value
RNA id TU36803
length 333
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G29375
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46656234 ~ 46656566 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

attttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtgttttaacagtgagagacagaataacaacaaaaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataaatatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatttcAGGAGGGATTTcttcccactcctctttgcagatcctctccaagtcattaaggtttagaggctgacgtttggcaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36778 lncRNA downstream 387956 46267893 ~ 46268278 (-) True G29354
TU36772 lncRNA downstream 405053 46250663 ~ 46251181 (-) True G29348
TU36706 lncRNA downstream 676766 45979260 ~ 45979468 (-) True G29294
TU36696 lncRNA downstream 862283 45793678 ~ 45793951 (-) True G29284
TU36651 lncRNA downstream 942197 45668901 ~ 45714037 (-) False G29249
TU36805 lncRNA upstream 67067 46723633 ~ 46723895 (-) True G29377
TU36809 lncRNA upstream 247226 46903792 ~ 46904222 (-) True G29381
TU36811 lncRNA upstream 274793 46931359 ~ 46934268 (-) True G29383
TU36825 lncRNA upstream 462071 47118637 ~ 47121378 (-) True G29397
TU36832 lncRNA upstream 753221 47409787 ~ 47410050 (-) True G29403
AMCG00008225 mRNA downstream 417705 46235003 ~ 46238529 (-) True AMCG00008225
AMCG00008224 mRNA downstream 421247 46200792 ~ 46234987 (-) True AMCG00008224
AMCG00008223 mRNA downstream 506071 46137748 ~ 46150163 (-) True AMCG00008223
AMCG00008222 mRNA downstream 532467 46111936 ~ 46123767 (-) True AMCG00008222
AMCG00008216 mRNA downstream 869253 45777462 ~ 45786981 (-) True AMCG00008216
AMCG00008228 mRNA upstream 90627 46747193 ~ 46747558 (-) True AMCG00008228
AMCG00008229 mRNA upstream 301299 46957865 ~ 46964572 (-) True AMCG00008229
AMCG00008230 mRNA upstream 324770 46981336 ~ 47013277 (-) True AMCG00008230
AMCG00008227 mRNA upstream 390156 47046722 ~ 47068199 (-) True AMCG00008227
AMCG00008231 mRNA upstream 435725 47092291 ~ 47117500 (-) True AMCG00008231
TU36785 other downstream 174336 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 601888 46050695 ~ 46054346 (-) True G29301
TU36269 other downstream 2238038 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 3891580 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 4806344 41846933 ~ 41849890 (-) True AMCG00008085
TU36922 other upstream 1057368 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 1467359 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 1624776 48281342 ~ 48283213 (-) False AMCG00008256
TU37454 other upstream 3139405 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 3397259 50053825 ~ 50054102 (-) True G29974

Expression Profile