RNA id: TU36825


Basic Information

Item Value
RNA id TU36825
length 438
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G29397
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47118637 ~ 47121378 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACAGAAGCTTCCCACCGCGCTTGAAACTGCTGAACTTCTGTTCCATCACGTGTTCCACATTTATGGGATTCCTGAGGACATTGTTTCCAACCGAGGCCCTCAATTCACCTCCCGCGTCTGGTCTGCTTTCTTCAAGGCTTTGAATATTAAGGTGCACCATGAGAAGAATCCTTATCATTGTGATGTGCAACTCTGGTTCCAGGCTGATGCGGCTCTAAAGACGAATGAGCACGGGATCTTGTCAGTGAGAGAGACGACACCATCATCCCTGAGCAGAAGAACTTGATACATCTAGAAAAAGAAGCAGGACCAAATCAATTTCCCCTCAGTCTGCAGACTTCAGGAGGCTATCAGACTCACACCAGAATCATCTGAAAGCCCCTGCCAGCCATCACGTTACTTGTACACCCAGATCTATATCttcggaatatatatata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36811 lncRNA downstream 184369 46931359 ~ 46934268 (-) True G29383
TU36809 lncRNA downstream 214415 46903792 ~ 46904222 (-) True G29381
TU36805 lncRNA downstream 394742 46723633 ~ 46723895 (-) True G29377
TU36803 lncRNA downstream 462071 46656234 ~ 46656566 (-) True G29375
TU36778 lncRNA downstream 850359 46267893 ~ 46268278 (-) True G29354
TU36832 lncRNA upstream 288409 47409787 ~ 47410050 (-) True G29403
TU36839 lncRNA upstream 409054 47530432 ~ 47530659 (-) True G29410
TU36859 lncRNA upstream 458910 47580288 ~ 47582074 (-) False AMCG00008233
TU36921 lncRNA upstream 545264 47666642 ~ 47918462 (-) False AMCG00008245
TU36925 lncRNA upstream 545264 47666642 ~ 47918462 (-) False AMCG00008245
AMCG00008231 mRNA downstream 1137 47092291 ~ 47117500 (-) True AMCG00008231
AMCG00008227 mRNA downstream 50438 47046722 ~ 47068199 (-) True AMCG00008227
AMCG00008230 mRNA downstream 105360 46981336 ~ 47013277 (-) True AMCG00008230
AMCG00008229 mRNA downstream 154065 46957865 ~ 46964572 (-) True AMCG00008229
AMCG00008228 mRNA downstream 371079 46747193 ~ 46747558 (-) True AMCG00008228
AMCG00008233 mRNA upstream 458761 47580139 ~ 47607012 (-) True AMCG00008233
AMCG00008234 mRNA upstream 494475 47615853 ~ 47619787 (-) True AMCG00008234
AMCG00008235 mRNA upstream 510952 47632330 ~ 47639937 (-) True AMCG00008235
AMCG00008236 mRNA upstream 521601 47642979 ~ 47676750 (-) True AMCG00008236
AMCG00008237 mRNA upstream 596329 47717707 ~ 47742362 (-) True AMCG00008237
TU36785 other downstream 636739 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 1064291 46050695 ~ 46054346 (-) True G29301
TU36269 other downstream 2700441 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 4353983 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 5268747 41846933 ~ 41849890 (-) True AMCG00008085
TU36922 other upstream 592556 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 1002547 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 1159964 48281342 ~ 48283213 (-) False AMCG00008256
TU37454 other upstream 2674593 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 2932447 50053825 ~ 50054102 (-) True G29974

Expression Profile