RNA id: TU36832


Basic Information

Item Value
RNA id TU36832
length 264
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G29403
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47409787 ~ 47410050 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGGTTTGTGCCCGCCCGATTGGCCAGCAGTGTATgtgctaaagaaaaggaaataaataagaatgtctGTTCGGATTAAAAGAAATCTGCCgcttttgcaaatgttatttgagGGGAGCCCGCGCCATAGGAAAGCTGTGCTGGCAGCGGCCCCCTCGAATTTGATCGAGACCCTGTGTGAAATAGCTTTAAACATCTTACGCGGTAATATACCCCTAACCCCTTCTCAACATtctaaactcaaaaaacaaaaagctgttatca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36825 lncRNA downstream 288409 47118637 ~ 47121378 (-) True G29397
TU36811 lncRNA downstream 475519 46931359 ~ 46934268 (-) True G29383
TU36809 lncRNA downstream 505565 46903792 ~ 46904222 (-) True G29381
TU36805 lncRNA downstream 685892 46723633 ~ 46723895 (-) True G29377
TU36803 lncRNA downstream 753221 46656234 ~ 46656566 (-) True G29375
TU36839 lncRNA upstream 120382 47530432 ~ 47530659 (-) True G29410
TU36859 lncRNA upstream 170238 47580288 ~ 47582074 (-) False AMCG00008233
TU36921 lncRNA upstream 256592 47666642 ~ 47918462 (-) False AMCG00008245
TU36925 lncRNA upstream 256592 47666642 ~ 47918462 (-) False AMCG00008245
TU36924 lncRNA upstream 303884 47713934 ~ 47890683 (-) False AMCG00008245
AMCG00008231 mRNA downstream 292287 47092291 ~ 47117500 (-) True AMCG00008231
AMCG00008227 mRNA downstream 341588 47046722 ~ 47068199 (-) True AMCG00008227
AMCG00008230 mRNA downstream 396510 46981336 ~ 47013277 (-) True AMCG00008230
AMCG00008229 mRNA downstream 445215 46957865 ~ 46964572 (-) True AMCG00008229
AMCG00008228 mRNA downstream 662229 46747193 ~ 46747558 (-) True AMCG00008228
AMCG00008233 mRNA upstream 170089 47580139 ~ 47607012 (-) True AMCG00008233
AMCG00008234 mRNA upstream 205803 47615853 ~ 47619787 (-) True AMCG00008234
AMCG00008235 mRNA upstream 222280 47632330 ~ 47639937 (-) True AMCG00008235
AMCG00008236 mRNA upstream 232929 47642979 ~ 47676750 (-) True AMCG00008236
AMCG00008237 mRNA upstream 307657 47717707 ~ 47742362 (-) True AMCG00008237
TU36785 other downstream 927889 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 1355441 46050695 ~ 46054346 (-) True G29301
TU36269 other downstream 2991591 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 4645133 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 5559897 41846933 ~ 41849890 (-) True AMCG00008085
TU36922 other upstream 303884 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 713875 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 871292 48281342 ~ 48283213 (-) False AMCG00008256
TU37454 other upstream 2385921 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 2643775 50053825 ~ 50054102 (-) True G29974

Expression Profile