RNA id: TU36839


Basic Information

Item Value
RNA id TU36839
length 228
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G29410
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47530432 ~ 47530659 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgaagtgctatctagcagggatagaggactaatattacaagtactgtcgaaaaagatgcatcttgagtaagcgccggaatgaagtcaaggactctgctgttttgacttcggtgggcaggtcgttccaccatttaggggccagggatgagaaggagcgggctctggaggtaggagagtggagaggaggtagagttagtcgtctggcactggaggagcgcagtggtctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36832 lncRNA downstream 120382 47409787 ~ 47410050 (-) True G29403
TU36825 lncRNA downstream 409054 47118637 ~ 47121378 (-) True G29397
TU36811 lncRNA downstream 596164 46931359 ~ 46934268 (-) True G29383
TU36809 lncRNA downstream 626210 46903792 ~ 46904222 (-) True G29381
TU36805 lncRNA downstream 806537 46723633 ~ 46723895 (-) True G29377
TU36859 lncRNA upstream 49629 47580288 ~ 47582074 (-) False AMCG00008233
TU36921 lncRNA upstream 135983 47666642 ~ 47918462 (-) False AMCG00008245
TU36925 lncRNA upstream 135983 47666642 ~ 47918462 (-) False AMCG00008245
TU36924 lncRNA upstream 183275 47713934 ~ 47890683 (-) False AMCG00008245
TU36976 lncRNA upstream 477998 48008657 ~ 48012955 (-) True G29521
AMCG00008231 mRNA downstream 412932 47092291 ~ 47117500 (-) True AMCG00008231
AMCG00008227 mRNA downstream 462233 47046722 ~ 47068199 (-) True AMCG00008227
AMCG00008230 mRNA downstream 517155 46981336 ~ 47013277 (-) True AMCG00008230
AMCG00008229 mRNA downstream 565860 46957865 ~ 46964572 (-) True AMCG00008229
AMCG00008228 mRNA downstream 782874 46747193 ~ 46747558 (-) True AMCG00008228
AMCG00008233 mRNA upstream 49480 47580139 ~ 47607012 (-) True AMCG00008233
AMCG00008234 mRNA upstream 85194 47615853 ~ 47619787 (-) True AMCG00008234
AMCG00008235 mRNA upstream 101671 47632330 ~ 47639937 (-) True AMCG00008235
AMCG00008236 mRNA upstream 112320 47642979 ~ 47676750 (-) True AMCG00008236
AMCG00008237 mRNA upstream 187048 47717707 ~ 47742362 (-) True AMCG00008237
TU36785 other downstream 1048534 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 1476086 46050695 ~ 46054346 (-) True G29301
TU36269 other downstream 3112236 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 4765778 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 5680542 41846933 ~ 41849890 (-) True AMCG00008085
TU36922 other upstream 183275 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 593266 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 750683 48281342 ~ 48283213 (-) False AMCG00008256
TU37454 other upstream 2265312 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 2523166 50053825 ~ 50054102 (-) True G29974

Expression Profile