RNA id: TU37143


Basic Information

Item Value
RNA id TU37143
length 332
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G29673
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48732260 ~ 48732591 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

actttcctactagcagtttcccttggttttctttccttagaggaacatctcccattgtcagagctccctgcccccctggttcctagtttaaatgattctcaatttcactgcacatacgctctcccaatgcattagccccccttctgtttagatgtagaccgtccggtttgtacaggtcccatctatcccagaagaaagcccaatgctccataaacctaaacccctcttccctacaccaagctttcaaccatgtgttaaactttctaatctctgcctgtctccctggcctggcacgtggtaccggaagtatttcagagaaaactaccatggag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37126 lncRNA downstream 78326 48565667 ~ 48653934 (-) True G29656
TU37077 lncRNA downstream 313357 48415003 ~ 48418903 (-) False AMCG00008255
TU37078 lncRNA downstream 313357 48415003 ~ 48418903 (-) False AMCG00008255
TU37079 lncRNA downstream 313357 48415003 ~ 48418903 (-) True AMCG00008255
TU37057 lncRNA downstream 399318 48332108 ~ 48332942 (-) True G29595
TU37146 lncRNA upstream 29381 48761972 ~ 48762297 (-) True G29676
TU37165 lncRNA upstream 100948 48833539 ~ 48833822 (-) True G29694
TU37166 lncRNA upstream 109760 48842351 ~ 48842613 (-) True G29695
TU37192 lncRNA upstream 191522 48924113 ~ 48940099 (-) True G29717
TU37201 lncRNA upstream 234447 48967038 ~ 48967343 (-) True G29723
AMCG00008257 mRNA downstream 34426 48674528 ~ 48697834 (-) True AMCG00008257
AMCG00008258 mRNA downstream 88318 48484395 ~ 48643942 (-) True AMCG00008258
AMCG00008255 mRNA downstream 313327 48411085 ~ 48418933 (-) False AMCG00008255
AMCG00008256 mRNA downstream 440817 48202621 ~ 48291443 (-) True AMCG00008256
AMCG00008254 mRNA downstream 529798 48042673 ~ 48202462 (-) True AMCG00008254
AMCG00008260 mRNA upstream 105557 48838148 ~ 48839345 (-) True AMCG00008260
AMCG00008259 mRNA upstream 127564 48860155 ~ 48861604 (-) True AMCG00008259
AMCG00008261 mRNA upstream 411582 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008264 mRNA upstream 443134 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008265 mRNA upstream 537029 49269620 ~ 49280998 (-) True AMCG00008265
TU37036 other downstream 449047 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 607578 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 813798 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2250362 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 2677914 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 1063380 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 1321234 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 1541147 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1791396 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile