RNA id: TU37146


Basic Information

Item Value
RNA id TU37146
length 326
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G29676
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48761972 ~ 48762297 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gccctgctttcctcaaagactttgtcttcaagtaactacggtggaaaaaccctgcttgcaaagaagattttgtgcacaaccttggagccttcaaaccagtggaaaatctgtttggaaaagactctgtttcgcgaaaccccaacttccaggtgcatcgactgagtggaagttcttggacaaagctgaaccggactgcctttgttccacaccacacggacctcgtgccgtgtgctgttatctgagcccgaagccagagaggcctctctgcgacgaagttcagttTAACAGTTTAGAGTTtatgattcatgacatttgagaaatcaatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37143 lncRNA downstream 29381 48732260 ~ 48732591 (-) True G29673
TU37126 lncRNA downstream 108038 48565667 ~ 48653934 (-) True G29656
TU37077 lncRNA downstream 343069 48415003 ~ 48418903 (-) False AMCG00008255
TU37078 lncRNA downstream 343069 48415003 ~ 48418903 (-) False AMCG00008255
TU37079 lncRNA downstream 343069 48415003 ~ 48418903 (-) True AMCG00008255
TU37165 lncRNA upstream 71242 48833539 ~ 48833822 (-) True G29694
TU37166 lncRNA upstream 80054 48842351 ~ 48842613 (-) True G29695
TU37192 lncRNA upstream 161816 48924113 ~ 48940099 (-) True G29717
TU37201 lncRNA upstream 204741 48967038 ~ 48967343 (-) True G29723
TU37266 lncRNA upstream 420471 49182768 ~ 49253244 (-) True AMCG00008264
AMCG00008257 mRNA downstream 64138 48674528 ~ 48697834 (-) True AMCG00008257
AMCG00008258 mRNA downstream 118030 48484395 ~ 48643942 (-) True AMCG00008258
AMCG00008255 mRNA downstream 343039 48411085 ~ 48418933 (-) False AMCG00008255
AMCG00008256 mRNA downstream 470529 48202621 ~ 48291443 (-) True AMCG00008256
AMCG00008254 mRNA downstream 559510 48042673 ~ 48202462 (-) True AMCG00008254
AMCG00008260 mRNA upstream 75851 48838148 ~ 48839345 (-) True AMCG00008260
AMCG00008259 mRNA upstream 97858 48860155 ~ 48861604 (-) True AMCG00008259
AMCG00008261 mRNA upstream 381876 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008264 mRNA upstream 413428 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008265 mRNA upstream 507323 49269620 ~ 49280998 (-) True AMCG00008265
TU37036 other downstream 478759 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 637290 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 843510 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2280074 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 2707626 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 1033674 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 1291528 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 1511441 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1761690 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile