RNA id: TU37201



Basic Information


Item Value
RNA id TU37201
length 306
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G29723
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48967038 ~ 48967343 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTTGCCCTCTCGTTCAATGCCTATATATGTTTATAGTAAGGAGAGCATTTCacttttctatttgttttgtttaaattggaCTGTTGGTGTTTTAGCTCAAGCAAGAATATCTAAATCCTGTATATCTATGTAACATATTTCCTCTTCCAAGCTCTGACTACACAAATGGGAACTGTTTAATACACTGATTTTTGCAgtatacacagacacagccacttatttttttttctcaatgtcTCAACGCTCTGTAAAGGTTATTCTATGATGCTTGCAAAACCAAACACATCTTAAATTGTAGAAGTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37192 lncRNA downstream 26939 48924113 ~ 48940099 (-) True G29717
TU37166 lncRNA downstream 124425 48842351 ~ 48842613 (-) True G29695
TU37165 lncRNA downstream 133216 48833539 ~ 48833822 (-) True G29694
TU37146 lncRNA downstream 204741 48761972 ~ 48762297 (-) True G29676
TU37143 lncRNA downstream 234447 48732260 ~ 48732591 (-) True G29673
TU37266 lncRNA upstream 215425 49182768 ~ 49253244 (-) True AMCG00008264
TU37301 lncRNA upstream 361230 49328573 ~ 49328840 (-) True G29806
TU37324 lncRNA upstream 432826 49400169 ~ 49400479 (-) True G29825
TU37325 lncRNA upstream 433307 49400650 ~ 49400872 (-) True G29826
TU37326 lncRNA upstream 434706 49402049 ~ 49402258 (-) True G29827
AMCG00008259 mRNA downstream 105434 48860155 ~ 48861604 (-) True AMCG00008259
AMCG00008260 mRNA downstream 127693 48838148 ~ 48839345 (-) True AMCG00008260
AMCG00008257 mRNA downstream 269204 48674528 ~ 48697834 (-) True AMCG00008257
AMCG00008258 mRNA downstream 323096 48484395 ~ 48643942 (-) True AMCG00008258
AMCG00008255 mRNA downstream 548105 48411085 ~ 48418933 (-) False AMCG00008255
AMCG00008261 mRNA upstream 176830 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008264 mRNA upstream 208382 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008265 mRNA upstream 302277 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008266 mRNA upstream 332190 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008267 mRNA upstream 378145 49345488 ~ 49361511 (-) True AMCG00008267
TU37036 other downstream 683825 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 842356 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1048576 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2485140 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 2912692 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 828628 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 1086482 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 1306395 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1556644 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile