RNA id: TU37324



Basic Information


Item Value
RNA id TU37324
length 311
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G29825
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49400169 ~ 49400479 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggggtccTTGCTTTTAATAGTCATGAAACCACTACTAAAGAGTTGGATACAGTTGAGGGctcttcttttaaaaatgtaatggctGGATAAATTGATGTTTCCATTACTGATGTTTAATAGGTCTGAGTGATACTTTTTTCTGACATTGTGTGACATTCGATTAGCATAGTTCGGATTGTACAAATTTCCTTTATCACTTTAGGCAAGTGTACctgctaaatgtattttagaatgGACTGAGCTGTTTATATGTTCCTGAATCCAGACAGTTGGTTCCCtggttttcaataaaacaacCTTTTTCATAAACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37301 lncRNA downstream 71329 49328573 ~ 49328840 (-) True G29806
TU37266 lncRNA downstream 146925 49182768 ~ 49253244 (-) True AMCG00008264
TU37201 lncRNA downstream 432826 48967038 ~ 48967343 (-) True G29723
TU37192 lncRNA downstream 460070 48924113 ~ 48940099 (-) True G29717
TU37166 lncRNA downstream 557556 48842351 ~ 48842613 (-) True G29695
TU37325 lncRNA upstream 171 49400650 ~ 49400872 (-) True G29826
TU37326 lncRNA upstream 1570 49402049 ~ 49402258 (-) True G29827
TU37338 lncRNA upstream 10877 49411356 ~ 49417214 (-) True G29834
TU37418 lncRNA upstream 115005 49515484 ~ 49588805 (-) True G29899
TU37411 lncRNA upstream 124263 49524742 ~ 49537281 (-) True AMCG00008273
AMCG00008267 mRNA downstream 38658 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 76166 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008265 mRNA downstream 119171 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008264 mRNA downstream 148270 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008261 mRNA downstream 230624 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008269 mRNA upstream 12913 49413392 ~ 49415125 (-) True AMCG00008269
AMCG00008268 mRNA upstream 77854 49478333 ~ 49479077 (-) True AMCG00008268
AMCG00008273 mRNA upstream 96921 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008274 mRNA upstream 253091 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 309387 49709866 ~ 49711609 (-) True AMCG00008275
TU37036 other downstream 1116956 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1275487 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1481707 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2918271 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3345823 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 395492 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 653346 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 873259 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1123508 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile