RNA id: TU37325



Basic Information


Item Value
RNA id TU37325
length 223
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G29826
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49400650 ~ 49400872 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAACTGCCCTGTGATACTAGTGCATGAAGCAAACTGCATGATAGCTGTAGGCAGCACCCCAGTAACAACCTTCCCCAGAGATGCGCTACCAGAGGGCATCCTGTATGTGATGGCCTACTATTATGTTCTGCATATGACCTACCCAAAATGCATGGCAACAGTGCTATCAGTGTTGCAGACTGAAGTGCTGCAAGATGCCATCCATGAGAGAGATGCGACCGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37324 lncRNA downstream 171 49400169 ~ 49400479 (-) True G29825
TU37301 lncRNA downstream 71810 49328573 ~ 49328840 (-) True G29806
TU37266 lncRNA downstream 147406 49182768 ~ 49253244 (-) True AMCG00008264
TU37201 lncRNA downstream 433307 48967038 ~ 48967343 (-) True G29723
TU37192 lncRNA downstream 460551 48924113 ~ 48940099 (-) True G29717
TU37326 lncRNA upstream 1177 49402049 ~ 49402258 (-) True G29827
TU37338 lncRNA upstream 10484 49411356 ~ 49417214 (-) True G29834
TU37418 lncRNA upstream 114612 49515484 ~ 49588805 (-) True G29899
TU37411 lncRNA upstream 123870 49524742 ~ 49537281 (-) True AMCG00008273
TU37412 lncRNA upstream 124369 49525241 ~ 49537281 (-) False AMCG00008273
AMCG00008267 mRNA downstream 39139 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 76647 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008265 mRNA downstream 119652 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008264 mRNA downstream 148751 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008261 mRNA downstream 231105 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008269 mRNA upstream 12520 49413392 ~ 49415125 (-) True AMCG00008269
AMCG00008268 mRNA upstream 77461 49478333 ~ 49479077 (-) True AMCG00008268
AMCG00008273 mRNA upstream 96528 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008274 mRNA upstream 252698 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 308994 49709866 ~ 49711609 (-) True AMCG00008275
TU37036 other downstream 1117437 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1275968 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1482188 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2918752 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3346304 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 395099 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 652953 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 872866 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1123115 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile