RNA id: TU37338



Basic Information


Item Value
RNA id TU37338
length 368
lncRNA type sense_over
GC content 0.52
exon number 2
gene id G29834
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49411356 ~ 49417214 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


taatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatattgtagcgatctgggactgggggggcggtgtgtgtgtgtgtgttgggttcTGTGTGGTGGGGGATGGGCTGTTTGTGTGTTAGCTGTTTAGCGGGGTTTCGTGGTTAAAGCTTGGCCCTGCACAGGAACATGGGATCCGCCGTGATTGGGAGAGACAGTCATGGGGCCAGAGGATATAAATAAGGGTGCCCGGTTCCCGCGCGCAGTGGAGTAGAGTCGGGGAGTAGGTCAGGAGTATGCGAGAGTGTGTGGAGGGTAGTGAGTCAGACGGTCGTTCAGCCTGAAATTGTGTGTTCAACAATAAAAGTTCCTGTTCGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37326 lncRNA downstream 9098 49402049 ~ 49402258 (-) True G29827
TU37325 lncRNA downstream 10484 49400650 ~ 49400872 (-) True G29826
TU37324 lncRNA downstream 10877 49400169 ~ 49400479 (-) True G29825
TU37301 lncRNA downstream 82516 49328573 ~ 49328840 (-) True G29806
TU37266 lncRNA downstream 158112 49182768 ~ 49253244 (-) True AMCG00008264
TU37418 lncRNA upstream 98270 49515484 ~ 49588805 (-) True G29899
TU37411 lncRNA upstream 107528 49524742 ~ 49537281 (-) True AMCG00008273
TU37412 lncRNA upstream 108027 49525241 ~ 49537281 (-) False AMCG00008273
TU37419 lncRNA upstream 168672 49585886 ~ 49588805 (-) False G29899
TU37426 lncRNA upstream 175064 49592278 ~ 49621960 (-) True G29904
AMCG00008267 mRNA downstream 49845 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 87353 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008265 mRNA downstream 130358 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008264 mRNA downstream 159457 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008261 mRNA downstream 241811 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008268 mRNA upstream 61119 49478333 ~ 49479077 (-) True AMCG00008268
AMCG00008273 mRNA upstream 80186 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008274 mRNA upstream 236356 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 292652 49709866 ~ 49711609 (-) True AMCG00008275
AMCG00008277 mRNA upstream 321841 49739055 ~ 49752628 (-) True AMCG00008277
TU37036 other downstream 1128143 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1286674 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1492894 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2929458 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3357010 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 378757 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 636611 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 856524 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1106773 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile