RNA id: TU37419


Basic Information

Item Value
RNA id TU37419
length 359
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G29899
representative False

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49515484 ~ 49588805 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aGTAGTAGTGTTGCAAACCTGTTACTTAAGAGAactgtgtaaaagccttattaatcaccttataattgttcattctacTCAGATAACATTTCACTccagtaaattatatatatatacatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatatcatcttgcagttgatggagatttgtgggatgtacattcagggcacgaagctcccgttccacaacatcccaaagatgctctattgggttgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37411 lncRNA downstream 48605 49524742 ~ 49537281 (-) True AMCG00008273
TU37412 lncRNA downstream 48605 49525241 ~ 49537281 (-) False AMCG00008273
TU37338 lncRNA downstream 168672 49411356 ~ 49417214 (-) True G29834
TU37326 lncRNA downstream 183628 49402049 ~ 49402258 (-) True G29827
TU37325 lncRNA downstream 185014 49400650 ~ 49400872 (-) True G29826
TU37426 lncRNA upstream 3473 49592278 ~ 49621960 (-) True G29904
TU37432 lncRNA upstream 21318 49610123 ~ 49614420 (-) True G29908
TU37450 lncRNA upstream 197526 49786331 ~ 49787892 (-) True G29926
TU37452 lncRNA upstream 207166 49795971 ~ 49905089 (-) False G29928
TU37489 lncRNA upstream 385621 49974426 ~ 49974646 (-) True G29957
AMCG00008273 mRNA downstream 48707 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008268 mRNA downstream 106809 49478333 ~ 49479077 (-) True AMCG00008268
AMCG00008269 mRNA downstream 170761 49413392 ~ 49415125 (-) True AMCG00008269
AMCG00008267 mRNA downstream 224375 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 261883 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008274 mRNA upstream 64765 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 121061 49709866 ~ 49711609 (-) True AMCG00008275
AMCG00008277 mRNA upstream 150250 49739055 ~ 49752628 (-) True AMCG00008277
AMCG00008276 mRNA upstream 184309 49773114 ~ 49775968 (-) True AMCG00008276
AMCG00008278 mRNA upstream 249391 49838196 ~ 49840087 (-) True AMCG00008278
TU37036 other downstream 1302673 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1461204 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1667424 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 3103988 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3531540 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 207166 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 465020 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 684933 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 935182 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile