RNA id: TU37586


Basic Information

Item Value
RNA id TU37586
length 213
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G30049
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50251710 ~ 50251922 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

attaaattcattattttcctcaaagttctacaaacaataccccacaatgacaacgtgaaagaagtttgaaatctttgcaaatttattaaaaaaaaaaaaaaaaaaagcacatgtacataagtattcacagcttttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggca

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37538 lncRNA downstream 66433 50185032 ~ 50185277 (-) True G30003
TU37522 lncRNA downstream 125579 50125640 ~ 50126131 (-) True G29987
TU37489 lncRNA downstream 277064 49974426 ~ 49974646 (-) True G29957
TU37452 lncRNA downstream 346621 49795971 ~ 49905089 (-) False G29928
TU37450 lncRNA downstream 463818 49786331 ~ 49787892 (-) True G29926
TU37588 lncRNA upstream 8834 50260756 ~ 50261187 (-) True G30051
TU37590 lncRNA upstream 15154 50267076 ~ 50267435 (-) True G30053
TU37595 lncRNA upstream 62250 50314172 ~ 50314425 (-) True G30058
TU37596 lncRNA upstream 76348 50328270 ~ 50334605 (-) True G30059
TU37601 lncRNA upstream 101973 50353895 ~ 50356348 (-) True G30061
AMCG00008287 mRNA downstream 95845 50147817 ~ 50155865 (-) True AMCG00008287
AMCG00008286 mRNA downstream 132404 50116033 ~ 50119306 (-) True AMCG00008286
AMCG00008285 mRNA downstream 161943 50087093 ~ 50089767 (-) True AMCG00008285
AMCG00008284 mRNA downstream 222090 49996960 ~ 50029620 (-) True AMCG00008284
AMCG00008282 mRNA downstream 264135 49947011 ~ 49987575 (-) True AMCG00008282
AMCG00008290 mRNA upstream 40410 50292332 ~ 50293363 (-) True AMCG00008290
AMCG00008289 mRNA upstream 56856 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008293 mRNA upstream 145817 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008295 mRNA upstream 199165 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008298 mRNA upstream 273398 50525320 ~ 50527378 (-) False AMCG00008298
TU37508 other downstream 197608 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 350759 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 1968497 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 2127028 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 2333248 47713934 ~ 47918462 (-) True AMCG00008245
TU37591 other upstream 21816 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 272065 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile