RNA id: TU37601


Basic Information

Item Value
RNA id TU37601
length 405
lncRNA type inter_gene
GC content 0.58
exon number 2
gene id G30061
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50353895 ~ 50356348 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCTGACCAGTCAGGAGTGGCTGATCGTAGATACGAGGCGTGGTCAGGCCGTGATGTCGGCGCCCCTGTTGGTTCGCTTGCCGGGTGGGGGGTTGGACCTGCAGTGGAACATGGCGAGAGCAGAGAACGGAGTCGAGGTTCACAGACAAGGAACCCAAGGCGACCCCGAACATAGGGGGCCGGGCAGTGGGGAGCCTCGATGGGGCCCGCAACATCCAGGTGCCCGGGAGCTCGCGGAGCTTTATTCTCCAGctgggcattttactggagcaatctaagtgaagtaccttgctcaagggtacaacagcactgcctcacccaggatttgaaccacaactccacagtgctgcccaggttcatcttccaacaggacaacaaccctaagcacacagccaagataacaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37596 lncRNA downstream 19290 50328270 ~ 50334605 (-) True G30059
TU37595 lncRNA downstream 39470 50314172 ~ 50314425 (-) True G30058
TU37590 lncRNA downstream 86460 50267076 ~ 50267435 (-) True G30053
TU37588 lncRNA downstream 92708 50260756 ~ 50261187 (-) True G30051
TU37586 lncRNA downstream 101973 50251710 ~ 50251922 (-) True G30049
TU37606 lncRNA upstream 29912 50386260 ~ 50386559 (-) True G30065
TU37618 lncRNA upstream 89371 50445719 ~ 50448970 (-) True G30070
TU37619 lncRNA upstream 90661 50447009 ~ 50448970 (-) False G30070
TU37636 lncRNA upstream 245109 50601457 ~ 50602050 (-) True G30086
TU37641 lncRNA upstream 257240 50613588 ~ 50613903 (-) True G30091
AMCG00008289 mRNA downstream 40460 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008290 mRNA downstream 60532 50292332 ~ 50293363 (-) True AMCG00008290
AMCG00008287 mRNA downstream 198030 50147817 ~ 50155865 (-) True AMCG00008287
AMCG00008286 mRNA downstream 234589 50116033 ~ 50119306 (-) True AMCG00008286
AMCG00008285 mRNA downstream 264128 50087093 ~ 50089767 (-) True AMCG00008285
AMCG00008293 mRNA upstream 41391 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008295 mRNA upstream 94739 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008298 mRNA upstream 168972 50525320 ~ 50527378 (-) False AMCG00008298
AMCG00008297 mRNA upstream 193717 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008300 mRNA upstream 435728 50792076 ~ 50798319 (-) True AMCG00008300
TU37591 other downstream 79712 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 299793 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 452944 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2070682 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 2229213 48123925 ~ 48124682 (-) True G29544
TU37623 other upstream 167639 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile