RNA id: TU37636


Basic Information

Item Value
RNA id TU37636
length 594
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G30086
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50601457 ~ 50602050 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtaaaaagtagtcggaagtcatacttgagtaaaagtaaaaatattctatcaaaaacatatgtaacgggttggggggcccgtcacaagaaagggctgtatgtaggcgggggTCTGGTCtggaaacacacagtagggatgcaggcagagggtacaaaacaggcttgccgttttattgcttcccttaatggcaggcacagtgtcaaaaagcaaaacaaaacctagctctgtgcgagcactaactaaacaatccctaactaaaaacaaacactaacaataaatgcccgggtcggtggagccgaacaccgggcaaACAGAAGCATAAAGGGAtaaggcaggttcgtagtcacagtccgtaatcaaagttcgttaccagtgggaggttgtcagacagtccggggtccaagagggagaatggtccaggtccagaaaaaaaGGTCacaagccagtgaatccgtcaactgtgaacTTTACCCTTGTTTCTCCtgctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgccgtcctgtgcaccttgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37618 lncRNA downstream 152487 50445719 ~ 50448970 (-) True G30070
TU37619 lncRNA downstream 152487 50447009 ~ 50448970 (-) False G30070
TU37606 lncRNA downstream 214898 50386260 ~ 50386559 (-) True G30065
TU37601 lncRNA downstream 245109 50353895 ~ 50356348 (-) True G30061
TU37596 lncRNA downstream 266852 50328270 ~ 50334605 (-) True G30059
TU37641 lncRNA upstream 11538 50613588 ~ 50613903 (-) True G30091
TU37644 lncRNA upstream 52169 50654219 ~ 50654513 (-) True G30094
TU37646 lncRNA upstream 57894 50659944 ~ 50660176 (-) True G30096
TU37660 lncRNA upstream 148371 50750421 ~ 50753174 (-) True G30108
TU37698 lncRNA upstream 466090 51068140 ~ 51068561 (-) True G30143
AMCG00008297 mRNA downstream 42136 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008298 mRNA downstream 74079 50525320 ~ 50527378 (-) False AMCG00008298
AMCG00008295 mRNA downstream 82918 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008293 mRNA downstream 195241 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008289 mRNA downstream 288022 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008300 mRNA upstream 190026 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008299 mRNA upstream 208329 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008302 mRNA upstream 238210 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008301 mRNA upstream 322002 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008303 mRNA upstream 425218 51027268 ~ 51036822 (-) True AMCG00008303
TU37623 other downstream 73421 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 327274 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 547355 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 700506 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2318244 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile