RNA id: TU37646


Basic Information

Item Value
RNA id TU37646
length 233
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G30096
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50659944 ~ 50660176 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaattctgtctCCAGTGTTACAGACAGTACACCTATAAAGAGGATAAACCCCACAAGTGTGCCGCTCTGAGGTGTCATCTCTGTAACGCCGACTTAACACCCGAGACCGAACACCAATGTTTCATACAGTCTGTTAAACCGGCACCCCTACATAACAAGTATGTCTTTTATGACTTTGAGTGTAGGCAGGAAGGAGGCGTTCATATAGCGaattatattcactgtataGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37644 lncRNA downstream 5431 50654219 ~ 50654513 (-) True G30094
TU37641 lncRNA downstream 46041 50613588 ~ 50613903 (-) True G30091
TU37636 lncRNA downstream 57894 50601457 ~ 50602050 (-) True G30086
TU37618 lncRNA downstream 210974 50445719 ~ 50448970 (-) True G30070
TU37619 lncRNA downstream 210974 50447009 ~ 50448970 (-) False G30070
TU37660 lncRNA upstream 90245 50750421 ~ 50753174 (-) True G30108
TU37698 lncRNA upstream 407964 51068140 ~ 51068561 (-) True G30143
TU37706 lncRNA upstream 522498 51182674 ~ 51182933 (-) True G30149
TU37732 lncRNA upstream 760471 51420647 ~ 51421417 (-) True G30170
TU37734 lncRNA upstream 765155 51425331 ~ 51425584 (-) True G30172
AMCG00008297 mRNA downstream 100623 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008298 mRNA downstream 132566 50525320 ~ 50527378 (-) False AMCG00008298
AMCG00008295 mRNA downstream 141405 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008293 mRNA downstream 253728 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008289 mRNA downstream 346509 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008300 mRNA upstream 131900 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008299 mRNA upstream 150203 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008302 mRNA upstream 180084 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008301 mRNA upstream 263876 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008303 mRNA upstream 367092 51027268 ~ 51036822 (-) True AMCG00008303
TU37623 other downstream 131908 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 385761 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 605842 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 758993 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2376731 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile