RNA id: TU37698


Basic Information

Item Value
RNA id TU37698
length 365
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G30143
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51068140 ~ 51068561 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aagtatttgatcccctatcaatcagcaaggtttctggctcccaggtgtcttttatacaggtaacgagctgagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaacatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagaagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaagaaacacaaaataactgtcagtctcccttggtcatgcaagatctcacctcacatggagtttcaatgatcatgagaacggtgaggaatcagcccagaactacacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37660 lncRNA downstream 314966 50750421 ~ 50753174 (-) True G30108
TU37646 lncRNA downstream 407964 50659944 ~ 50660176 (-) True G30096
TU37644 lncRNA downstream 413627 50654219 ~ 50654513 (-) True G30094
TU37641 lncRNA downstream 454237 50613588 ~ 50613903 (-) True G30091
TU37636 lncRNA downstream 466090 50601457 ~ 50602050 (-) True G30086
TU37706 lncRNA upstream 114113 51182674 ~ 51182933 (-) True G30149
TU37732 lncRNA upstream 352086 51420647 ~ 51421417 (-) True G30170
TU37734 lncRNA upstream 356770 51425331 ~ 51425584 (-) True G30172
TU37786 lncRNA upstream 685522 51754083 ~ 51754304 (-) True G30218
TU37788 lncRNA upstream 776934 51845495 ~ 51845770 (-) True G30220
AMCG00008303 mRNA downstream 31318 51027268 ~ 51036822 (-) True AMCG00008303
AMCG00008301 mRNA downstream 131340 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008302 mRNA downstream 151760 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008299 mRNA downstream 254334 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008300 mRNA downstream 269821 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008305 mRNA upstream 352913 51421474 ~ 51441540 (-) True AMCG00008305
AMCG00008306 mRNA upstream 402658 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008307 mRNA upstream 442193 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008311 mRNA upstream 674848 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008312 mRNA upstream 999921 52068482 ~ 52069809 (-) True AMCG00008312
TU37623 other downstream 540104 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 793957 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 1014038 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 1167189 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2784927 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile