RNA id: TU37706


Basic Information

Item Value
RNA id TU37706
length 260
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G30149
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51182674 ~ 51182933 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atctgcaaagaggagtgggacaaactccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaaatactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcatttttctggatttttttgttgttattctatctctcactgttaaaatacacctaccattaaaattatagactgatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37698 lncRNA downstream 114113 51068140 ~ 51068561 (-) True G30143
TU37660 lncRNA downstream 429500 50750421 ~ 50753174 (-) True G30108
TU37646 lncRNA downstream 522498 50659944 ~ 50660176 (-) True G30096
TU37644 lncRNA downstream 528161 50654219 ~ 50654513 (-) True G30094
TU37641 lncRNA downstream 568771 50613588 ~ 50613903 (-) True G30091
TU37732 lncRNA upstream 237714 51420647 ~ 51421417 (-) True G30170
TU37734 lncRNA upstream 242398 51425331 ~ 51425584 (-) True G30172
TU37786 lncRNA upstream 571150 51754083 ~ 51754304 (-) True G30218
TU37788 lncRNA upstream 662562 51845495 ~ 51845770 (-) True G30220
TU37793 lncRNA upstream 746173 51929106 ~ 51929379 (-) True G30225
AMCG00008303 mRNA downstream 145852 51027268 ~ 51036822 (-) True AMCG00008303
AMCG00008301 mRNA downstream 245874 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008302 mRNA downstream 266294 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008299 mRNA downstream 368868 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008300 mRNA downstream 384355 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008305 mRNA upstream 238541 51421474 ~ 51441540 (-) True AMCG00008305
AMCG00008306 mRNA upstream 288286 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008307 mRNA upstream 327821 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008311 mRNA upstream 560476 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008312 mRNA upstream 885549 52068482 ~ 52069809 (-) True AMCG00008312
TU37623 other downstream 654638 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 908491 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 1128572 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 1281723 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2899461 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile