RNA id: TU37734


Basic Information

Item Value
RNA id TU37734
length 254
lncRNA type intronic
GC content 0.35
exon number 1
gene id G30172
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51425331 ~ 51425584 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTTAAATCTAGCCATGGCCATCTGCTAGCGCACTCTTCATGCATGGAGCTCTATTTATAATTATTGGGACCAGACAGCAGGTCAACATTAGTGTGTAAAGTGTTAATGTGCATTACCTAAACTTACACATGATTTGTATGCATCTGAACAGATTTTGTCAGGGTTTTTGTATTACGGAAGAAGATGTTTAGGGATTCCagtaatttttttgtatatagaaTATACTTTAAGACATTACACTATTTCTGGTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37732 lncRNA downstream 3914 51420647 ~ 51421417 (-) True G30170
TU37706 lncRNA downstream 242398 51182674 ~ 51182933 (-) True G30149
TU37698 lncRNA downstream 356770 51068140 ~ 51068561 (-) True G30143
TU37660 lncRNA downstream 672157 50750421 ~ 50753174 (-) True G30108
TU37646 lncRNA downstream 765155 50659944 ~ 50660176 (-) True G30096
TU37786 lncRNA upstream 328499 51754083 ~ 51754304 (-) True G30218
TU37788 lncRNA upstream 419911 51845495 ~ 51845770 (-) True G30220
TU37793 lncRNA upstream 503522 51929106 ~ 51929379 (-) True G30225
TU37796 lncRNA upstream 641624 52067208 ~ 52067456 (-) True G30228
TU37799 lncRNA upstream 666048 52091632 ~ 52093655 (-) True G30231
AMCG00008303 mRNA downstream 388509 51027268 ~ 51036822 (-) True AMCG00008303
AMCG00008301 mRNA downstream 488531 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008302 mRNA downstream 508951 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008299 mRNA downstream 611525 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008300 mRNA downstream 627012 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008306 mRNA upstream 45635 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008307 mRNA upstream 85170 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008311 mRNA upstream 317825 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008312 mRNA upstream 642898 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008313 mRNA upstream 711585 52137169 ~ 52144727 (-) True AMCG00008313
TU37623 other downstream 897295 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 1151148 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 1371229 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 1524380 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 3142118 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile