RNA id: TU37799


Basic Information

Item Value
RNA id TU37799
length 606
lncRNA type inter_gene
GC content 0.38
exon number 4
gene id G30231
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52091632 ~ 52093655 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCGAAAcggtgcattatgggatttGCATGAagttttggtgtattttttttcctctctacataatggaaaacctgcataatttcttatttcggtcttctcttttaaaaacaattgcatttttaacacgatgcacctggattgtattagaACAGCCCTTCTCACAGATGGGAGAAAAGCGGGAGTTCACTCGGAGTCTGTGGTGGCTGTGAAGACCCCGCACACTCCGCCATTTCTCAGAAGACAGGATCAGTAAAGTGCGATATGtgtaTTCAGAGAAGGCCATGTCCGCTCACTGACATCAGCAAATACTaatattcaatttctcattcttaaaacaaaaattggaGCATCTGGAGCAGAATCAAGGAATCATCATGAGGGATCAATCCTAATAAAAATTATCCCTGACGAGGATGAACACAACCAGTTGGTCGACAAAGTAGAGGAGTTTGAGGGATTTTCAAATGTTTGAAGCATTTTCATGATGAGGTGGCGATAGAAGTAAAACGaggaaaactgaacaaaatgaagACTACAGTAGAATTCTAAGTGCTTCATCAAATTTAAACATTGTACAGatcactaataaatacatttctgaacata

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37796 lncRNA downstream 24176 52067208 ~ 52067456 (-) True G30228
TU37793 lncRNA downstream 162253 51929106 ~ 51929379 (-) True G30225
TU37788 lncRNA downstream 245862 51845495 ~ 51845770 (-) True G30220
TU37786 lncRNA downstream 337328 51754083 ~ 51754304 (-) True G30218
TU37734 lncRNA downstream 666048 51425331 ~ 51425584 (-) True G30172
TU37801 lncRNA upstream 7385 52101040 ~ 52101320 (-) True G30233
TU37805 lncRNA upstream 63135 52156790 ~ 52157079 (-) True G30237
TU37836 lncRNA upstream 185202 52278857 ~ 52279119 (-) True G30266
TU37840 lncRNA upstream 195235 52288890 ~ 52289123 (-) True G30270
TU37845 lncRNA upstream 232050 52325705 ~ 52326037 (-) True G30275
AMCG00008312 mRNA downstream 21823 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008311 mRNA downstream 347834 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008307 mRNA downstream 576232 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008306 mRNA downstream 594420 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008305 mRNA downstream 650092 51421474 ~ 51441540 (-) True AMCG00008305
AMCG00008313 mRNA upstream 43514 52137169 ~ 52144727 (-) True AMCG00008313
AMCG00008314 mRNA upstream 95527 52189182 ~ 52250096 (-) True AMCG00008314
AMCG00008322 mRNA upstream 159022 52252677 ~ 52293414 (-) True AMCG00008322
AMCG00008318 mRNA upstream 235581 52329236 ~ 52339097 (-) True AMCG00008318
AMCG00008321 mRNA upstream 251374 52345029 ~ 52345527 (-) True AMCG00008321
TU37623 other downstream 1563596 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 1817449 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2037530 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2190681 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 3808419 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile