RNA id: TU37805


Basic Information

Item Value
RNA id TU37805
length 290
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G30237
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52156790 ~ 52157079 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

agttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagttgctcagatccttacgcttgcccatttttcctgcttctaacacatcagctttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataacgtgattatcagtgttattcacttcacctgtcagtggtcataatgttatggctgatcggtgtatatatatgtgtaactTAAAAAACATCCGTACACTATAGCGTCTTCACTTctatgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37801 lncRNA downstream 55470 52101040 ~ 52101320 (-) True G30233
TU37799 lncRNA downstream 63135 52091632 ~ 52093655 (-) True G30231
TU37796 lncRNA downstream 89334 52067208 ~ 52067456 (-) True G30228
TU37793 lncRNA downstream 227411 51929106 ~ 51929379 (-) True G30225
TU37788 lncRNA downstream 311020 51845495 ~ 51845770 (-) True G30220
TU37836 lncRNA upstream 121778 52278857 ~ 52279119 (-) True G30266
TU37840 lncRNA upstream 131811 52288890 ~ 52289123 (-) True G30270
TU37845 lncRNA upstream 168626 52325705 ~ 52326037 (-) True G30275
TU37846 lncRNA upstream 169082 52326161 ~ 52326391 (-) True G30276
TU37855 lncRNA upstream 180404 52337483 ~ 52338366 (-) False AMCG00008318
AMCG00008313 mRNA downstream 12063 52137169 ~ 52144727 (-) True AMCG00008313
AMCG00008312 mRNA downstream 86981 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008311 mRNA downstream 412992 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008307 mRNA downstream 641390 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008306 mRNA downstream 659578 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008314 mRNA upstream 32103 52189182 ~ 52250096 (-) True AMCG00008314
AMCG00008322 mRNA upstream 95598 52252677 ~ 52293414 (-) True AMCG00008322
AMCG00008318 mRNA upstream 172157 52329236 ~ 52339097 (-) True AMCG00008318
AMCG00008321 mRNA upstream 187950 52345029 ~ 52345527 (-) True AMCG00008321
AMCG00008319 mRNA upstream 199422 52356501 ~ 52362043 (-) True AMCG00008319
TU37623 other downstream 1628754 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 1882607 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2102688 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2255839 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 3873577 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile