RNA id: AMCG00008361


Basic Information

Item Value
RNA id AMCG00008361
length 1277
RNA type mRNA
GC content 0.60
exon number 9
gene id AMCG00008361
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41639 ~ 43775 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCACAAGGGTGACGTGGAGGTAGTGACGCAGTGACACACAGTGGTgtagacagacggacagacgtGGGTCCGGCGGTTCATCGTACTGCTCTCAGTGACTCGGACCCTCTCTGATCGGGACCCAACCCGCCCACAGCGCAGCGCCATACGGGACACCGAGGATTGCGCGCTGAAGGGTGCGCCATGGCCAGCCCCGACGACCTGAAGTTCCAAGaGTTCGAAGAGGCCGCAGACCTGCTGTCCGCTGACCCAGGTGCCTCCACCAACcccattcacaaacacacagacggGGACGGGGGTATAAAGCTTGACCTCTCGGAGGATGAGGACGCAGAGGAGAAGTCGGAGCTGCTGAGTGGAGAGAGGCCCGCAGCCAGCTTCTGGACTTTCGAGTATTACCAGTCCTTCTTCAACATCGACACCATGCAGgtGCTGGACAGGATCAAAGGCTCCCTGCTGCCGTTGCCAGGGCGAAACTTTGTGAAACACCACCTCCGTAGCAACCCAGATCTGTATGggccaTTCTGGATCTGTGCCACCCTGGTGTTCACTATGGCCATCAGCGGGAATTTCTCCACCTTCCTGTTGCGGAAGGGCGACCCTCAGTATCACTACAGGCCCCAGTTCCACAAGGTGTCCATCGCGGGGCTGGCGGTGTTCAGTTACTCCTGGCTCACCCCGCTGTGCGTGTGGGGGCTCCTCCAGTGGCGCAGCACCCGGCACGGCCGCAGCAGCTACTCCTTCCTGGAGACGGTCAGCGTGTACGGATACTCGCTGTTCATCTACATCCCCACAGCCGTGCTGTGGACCGTGCCGCTGGAGTGGCTGCGCTGGCTACTGATCCTGGGGGCCACGGCGGTGTCAGGCGCGGTGCTGCTGCTCAGCTTCTGGCCGCTCGTCCGCGATGACAGCAGGCCGGTGGCCCTCGCCACGCTGACGGGCATCctctATTTCTTCCAGACAGCCATTCAcacagtgacccttccctcagAGGCCCCCCCCATAGCCAACCTCAACCTCACCCACGCGTAGGGCCCTGCTGCGGAGGAGTGGGGGGCTGAGGGGACGGGCAGGACTGGACAGAGCGCCACGGGACCCTGCGCTGCACGCGACAGTGGAGCCACACTGCCCAGGGCTCCCCAGCACAGAGGAGGACATGGCCACGATGCTTCTGCCTCGCAGCAGCCCAGGGGCGGGATTATTATAAAGagaataatatttatgtttgttttttctatgttgagattaaaatgacatttgcaTACCCTTGAGAATAA

Function

GO: NA

KEGG:

id description
K22940 YIPF1_2; protein YIPF1/2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60756 lncRNA downstream 50874 94649 ~ 97129 (+) True G48618
TU60776 lncRNA downstream 160706 204481 ~ 204901 (+) True G48631
TU60785 lncRNA downstream 178278 222053 ~ 222787 (+) True G48636
TU60784 lncRNA downstream 178304 222079 ~ 222787 (+) False G48636
TU60786 lncRNA downstream 181490 225265 ~ 225944 (+) True G48637
AMCG00008362 mRNA downstream 11787 55562 ~ 57874 (+) True AMCG00008362
AMCG00008363 mRNA downstream 16514 60289 ~ 70750 (+) True AMCG00008363
AMCG00008369 mRNA downstream 44063 87838 ~ 94561 (+) True AMCG00008369
AMCG00008368 mRNA downstream 53794 97569 ~ 111307 (+) True AMCG00008368
AMCG00008367 mRNA downstream 83281 127056 ~ 127729 (+) True AMCG00008367
TU60757 other downstream 43542 87317 ~ 92880 (+) False AMCG00008369
TU60768 other downstream 123183 166958 ~ 167498 (+) False AMCG00008375
TU60995 other downstream 506506 550281 ~ 551906 (+) True G48811
TU61033 other downstream 543505 587280 ~ 588446 (+) True G48846
TU61256 other downstream 832779 876554 ~ 879513 (+) True G49013

Expression Profile