RNA id: AMCG00008363


Basic Information

Item Value
RNA id AMCG00008363
length 1985
RNA type mRNA
GC content 0.63
exon number 14
gene id AMCG00008363
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 60289 ~ 70750 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGGGGGGCAGTTAGCCACTGCTCTGCTCATTCTGATGTAATTTGCTGCAGATTCCTGTGTCACCTTACCACACAGCTCTGACCAGTGGCCAGACTGTATTATTGCATCTGAGTTCATTATTAGTCGATTGAACAGTCATTGTCCGAAGCCATTATAAACTCCCTTGGGGCCGCTGACGTCACAGCCTCATGGGCAGTGGTTCCAGGTGCCGGTCCGCGACTGTCGTGTCCCCCTACAGCTGCTCTAGTGCGGGTCAGGCGACCAATCTGCTGCCGTCTCTCTCACGATGTTGATCTCTCAGCCAATCGGAATGAGTTGCTTCTATCGCCGTGGAGTTTGAACAGGGACGGAGATCGACTACCTCAATAAAACCACCCGGACAGCAGCCAGTGCAGGACAGCCTCCGCCCGCCGCTGGCCGGCTCCCTCATGACCCACCGGACCAGCCCGCCGCTCTTCCGCCCGCCGGGGGCCACGCAGTGGCGCAGCACGGAGCCGCTCAGAGCCGTGTCCACGATGATGGAGTCCACACGCTGGCCAACGGACTCTGAGCTCGACTCCAGGTCACCAGGGCTGCAGGACACCTTCAGTATCGACTCTCCATGCAGCCCCCACCACACTGACCGGCTCTACAGTGCCGAGACCGCAGCGCTGGGGCTGCCCTCCGTGTGTGAGGGGGAACAGGGCCGAACGAGCTCCTCTGTGGTGGTCCTGCTGAACTGCGCCTGGTCCCTGCTCACCCTGCACCAGCAGACCCGGACCAGACTGAGAcaggcggagagagagagagagcgaatgGACACCCTGAggGAGAAGCTGCAGGAGAGGGATGTCCATGTCGCTGCGCTGCAGGACAGCCTGAGGACGCTGCGGGAGCAGAACTCGGAGCTGCACAGCTCTCTGAGGGCGGAGAGGGAGCAGTGTGTGCGGCTGCGGTCCCGGGACACCCAGCAGGCCGCGGAGCTGAGGCGACGGGAGCAGCAGCGGGAGGAGGCGCTGCAGCGGCTGCTGGAGGCGGGGCAGGCGGAGCTGCAGGGGGCGGAGTCTCGCAGTCACCGCCTCGCTGGCCTGCTGGCCGGACTGAGCCGAGACATGGGCGGCCTGCTGTGCCGGGGCGGGGCGGCCCCGGACGATGTGGAGGCTGGGGGGGAGGGTCCAGATTGGGAGCAGCTGGTCCAATCGGAGGCAGATCTGGGGGACCATGTGACTGGGGGCGTGGTGCGGCTGTGGAGCAGCGTGAGGATGATCCTGGAGGAGCTGCCGACACACGGCTTTTCCTCAGTGCCCATGGGTACAGACCAAGAGAAGCAGCTGGCGCAGCTGCAGGTGGAACTGGATCGCAGTCACCAGCTGATCCGGCTGCAGCAGGAGCTCCTGCAGgagagcgtctctcctgctctcccctcctccctcgcTCACTGTTACCACCTGGAGGAGTGGGAGCGCCTCCGGGCCGAGAGGACGGAGCTTGACTCTCAGCGGCGCAGATTCCAGGAGGAAAGGCAGAGATTCACCGAGGCTGCCATCCGATTGGGCCAcgagcgCTGTCAGTTCGACCAGCAGAGGGCGTCGGTCCTGCAGCAGCAGTTCCTCAGTCTTTCGCCCAGCCCCCGTGGTCTGGATCAGGTGACCCCCTCTCGCTCTGGCCGGGCTGCAGCCTCCTCCCCGGGGTCAGCAGTCGCTTTGCAGAGACTGGTGAATAGGACACCCGCCTACACCCCCCCACCTGCACACAGCAGCACCAGCTGCAAAACACCAGTAGAGGGACACAAAGCCCAACAAGCCCCCGACACCAAGCAGTGCCAGGGCCCCAACATTGCAGGACCCAGCTTCCATGACCTCGTACAGCTGCCCAAGCGCAGGAAAGCCTCCGATTTAGTCCGATTTTCATGTGAAGACACTTGGGACCCCAGAGTTAGCAATGGCGGGAGAATAGACACCCCCTGCTCAGGACTGCAGTGGGTCACGCTGGTTCCCGCCAAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60756 lncRNA downstream 23899 94649 ~ 97129 (+) True G48618
TU60776 lncRNA downstream 133731 204481 ~ 204901 (+) True G48631
TU60785 lncRNA downstream 151303 222053 ~ 222787 (+) True G48636
TU60784 lncRNA downstream 151329 222079 ~ 222787 (+) False G48636
TU60786 lncRNA downstream 154515 225265 ~ 225944 (+) True G48637
AMCG00008362 mRNA upstream 2415 55562 ~ 57874 (+) True AMCG00008362
AMCG00008361 mRNA upstream 16514 41639 ~ 43775 (+) True AMCG00008361
AMCG00008369 mRNA downstream 17088 87838 ~ 94561 (+) True AMCG00008369
AMCG00008368 mRNA downstream 26819 97569 ~ 111307 (+) True AMCG00008368
AMCG00008367 mRNA downstream 56306 127056 ~ 127729 (+) True AMCG00008367
AMCG00008375 mRNA downstream 82439 153189 ~ 204395 (+) True AMCG00008375
AMCG00008371 mRNA downstream 143895 214645 ~ 218875 (+) True AMCG00008371
TU60757 other downstream 16567 87317 ~ 92880 (+) False AMCG00008369
TU60768 other downstream 96208 166958 ~ 167498 (+) False AMCG00008375
TU60995 other downstream 479531 550281 ~ 551906 (+) True G48811
TU61033 other downstream 516530 587280 ~ 588446 (+) True G48846
TU61256 other downstream 805804 876554 ~ 879513 (+) True G49013

Expression Profile