RNA id: AMCG00008369


Basic Information

Item Value
RNA id AMCG00008369
length 1278
RNA type mRNA
GC content 0.65
exon number 9
gene id AMCG00008369
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 87317 ~ 94561 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGCGACCCGCGGGCTCGGTTCCGTGTGCCGGGGTTGGGGTCAGCGCTGGGCTGGCCGTGGCCTCTGACCCAGGTCCGCTGCCAGGACTACAATAACGGCTCGGACCCGGAGATGGAGAAGAGGTGGGCCGAACTGTTCGAGCAGCTGGACCTCAACAAGGACGGACGGGTGGACGTGCAGGAGCTGAGGCAGGGGCTCACGGCGCGGGGCATGACTCTGGGGAGCAAGGCCGAGGAGgagattgTGCGGGTGGGGGACACTGACCAGGACGGGGAGCTGGACTTCCAGGAGTTCTGCCAGTACCTGCGCTCCCACGAGAAACAGCTGCGCCTCATGTTCCGCAGCCTGGACTGCAACAATGACGgtCAGATTGACGTGGGGGAGATCCAGCAGGCCTTGCACAGCCTGGGCGTTGACGTCACCACAGAGCAGGCCTTCACCATCCTGCAGGGGATTGACAGGGACGGCACCATGACGATTGACTGGAACGAGTGGCGAGATCACTTCCTGCTCAACCCCCTGACCAACATGGAGGACATTGCGCACTACTGGAAACACTCAGTGGTGCTGGACATTGGGGAGAGCCTGACGGTGCCGGACGAGTTCTCGGAGCGGGAGCGGCGCTCGGGGGGGTGGTGGAAGCAGCTGATCGCGGGTGCGATAGCGGGGGCGGTGTCTCGCACAGGCACGGCCCCCCTCGACCGCCTGAAAGTGTTCCTGCAGGTGCAGGGCGGGACCCTGGGCTGGAGGGTGCTcggggggctgcgggggatgGTGCAGGAGGGGGGCGTGCGGTCACTCTGGAGGGGAAACGGCATCAACGAGGGGTCGCTCAGAGTTCACGAGCGCTTCATCGCCGGGTCGCTTGCTGGAGCCACGGCCCAGACTGTCATCTACCCCATGGAGGTGGGTCAGAAACGGGACAGTAACCCCCAGTGGGGTACCGGGGATACCATAGAAGTGGTGCAGGAAAGGCCACGGCAGGGGGGTGTGATCTGTGCGTGCCTCACTCTGCCCCCCTCTCGCCCCAGTACCTGTGGTCAGCTGGCCAGCTACCCCCTGGCACTGATCCGCACACGCATGCAGGCCCAGGcctcGGTGGAGGGGGCACCGCAGCTGTCCATGGTGGGTCAGTTCCGGCACATCGTGTCGAGGGAGGGGCTGCCTGGCCTGTACCGCGGCCTGGCCCCCAACTTCCTGAAGGTCATCCCTGCGGTCAGCATCAGTTACGTGGTGTACGAGAACACCAAGAGGGTGCTGGGGGGGGCGGGGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60756 lncRNA downstream 88 94649 ~ 97129 (+) True G48618
TU60776 lncRNA downstream 109920 204481 ~ 204901 (+) True G48631
TU60785 lncRNA downstream 127492 222053 ~ 222787 (+) True G48636
TU60784 lncRNA downstream 127518 222079 ~ 222787 (+) False G48636
TU60786 lncRNA downstream 130704 225265 ~ 225944 (+) True G48637
AMCG00008363 mRNA upstream 17088 60289 ~ 70750 (+) True AMCG00008363
AMCG00008362 mRNA upstream 29964 55562 ~ 57874 (+) True AMCG00008362
AMCG00008361 mRNA upstream 44063 41639 ~ 43775 (+) True AMCG00008361
AMCG00008368 mRNA downstream 3008 97569 ~ 111307 (+) True AMCG00008368
AMCG00008367 mRNA downstream 32495 127056 ~ 127729 (+) True AMCG00008367
AMCG00008375 mRNA downstream 58628 153189 ~ 204395 (+) True AMCG00008375
AMCG00008371 mRNA downstream 120084 214645 ~ 218875 (+) True AMCG00008371
AMCG00008372 mRNA downstream 140334 234895 ~ 243054 (+) True AMCG00008372
TU60768 other downstream 72397 166958 ~ 167498 (+) False AMCG00008375
TU60995 other downstream 455720 550281 ~ 551906 (+) True G48811
TU61033 other downstream 492719 587280 ~ 588446 (+) True G48846
TU61256 other downstream 781993 876554 ~ 879513 (+) True G49013
TU61359 other downstream 871277 965838 ~ 968583 (+) True AMCG00008423

Expression Profile