RNA id: TU60768



Basic Information


Item Value
RNA id TU60768
length 376
RNA type TUCP
GC content 0.70
exon number 2
gene id AMCG00008375
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 153189 ~ 204395 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GACACAGGGGCAGTCGGGGGGGGCCTGACGGAATGGGGGGCGGCGAGGAGGAGGCAGCGGAGAGACGGAGGCGCCATCGCCATGGAGCCCAGTCCACCTACGACAGCGATGGCAAGAGggacggagagagggagcgcCGGCACCGGCGCAggaaAGAGGGTCAGAGTAACGGCCCGTCCTCCGGCCCCAGTCTGTCCACCACGCGTCCCATCCAGCAGTGTGTCCCCAGGCAGGACAGCCAGCAGAGCCAGCAGAGCGAGGACATGGACAACCTGCGCAACAACAGCAAGCTGGCCACTCAGCCGCCCCCCATGACCCGCCCCCACGCCAATCACAGTGCCCCCGGCAGCCCGGCCAAGAGCggcaacccccctcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60756 lncRNA upstream 69829 94649 ~ 97129 (+) True G48618
TU60776 lncRNA downstream 36983 204481 ~ 204901 (+) True G48631
TU60785 lncRNA downstream 54555 222053 ~ 222787 (+) True G48636
TU60784 lncRNA downstream 54581 222079 ~ 222787 (+) False G48636
TU60786 lncRNA downstream 57767 225265 ~ 225944 (+) True G48637
TU60796 lncRNA downstream 83809 251307 ~ 252482 (+) True G48647
AMCG00008367 mRNA upstream 39229 127056 ~ 127729 (+) True AMCG00008367
AMCG00008368 mRNA upstream 55651 97569 ~ 111307 (+) True AMCG00008368
AMCG00008369 mRNA upstream 72397 87838 ~ 94561 (+) True AMCG00008369
AMCG00008363 mRNA upstream 96208 60289 ~ 70750 (+) True AMCG00008363
AMCG00008362 mRNA upstream 109084 55562 ~ 57874 (+) True AMCG00008362
AMCG00008371 mRNA downstream 47147 214645 ~ 218875 (+) True AMCG00008371
AMCG00008372 mRNA downstream 67397 234895 ~ 243054 (+) True AMCG00008372
AMCG00008374 mRNA downstream 85981 253479 ~ 256222 (+) True AMCG00008374
AMCG00008376 mRNA downstream 92826 260324 ~ 261908 (+) False AMCG00008376
AMCG00008373 mRNA downstream 102262 269760 ~ 273986 (+) True AMCG00008373
TU60757 other upstream 74078 87317 ~ 92880 (+) False AMCG00008369
TU60995 other downstream 382783 550281 ~ 551906 (+) True G48811
TU61033 other downstream 419782 587280 ~ 588446 (+) True G48846
TU61256 other downstream 709056 876554 ~ 879513 (+) True G49013
TU61359 other downstream 798340 965838 ~ 968583 (+) True AMCG00008423
TU61499 other downstream 1155313 1322811 ~ 1324269 (+) True G49208

Expression Profile