RNA id: AMCG00008376



Basic Information


Item Value
RNA id AMCG00008376
length 288
RNA type mRNA
GC content 0.64
exon number 3
gene id AMCG00008376
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 260274 ~ 263022 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GACCGCTACATCCTGTCTGGGAGTGAGGACCGCACCCTGGCCGTGTTCGACCGCCGGGCTGGCAGACTGCTGCACAAGATACAGCTGAGCTCATACCTGCTGTCCCTGAGCTACGGGCGTGAGGGGGCGGAGCTATGGGCAGGGGATAACCAGGGTCAGCTGCACGCTTTCTCCCCATCCTGCGGCTCCTTCCTGCCCCTGGGGCAGTTCTCTctcagTGTGGAGGGAGGGATGCTGGCGGCCGCTTCGGGGGACATGTCAGTGGAGGTGTGGAAGGTGGAGGAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60881 lncRNA upstream 2060 257582 ~ 258264 (+) True G48716
TU60796 lncRNA upstream 7842 251307 ~ 252482 (+) True G48647
TU60786 lncRNA upstream 34380 225265 ~ 225944 (+) True G48637
TU60785 lncRNA upstream 37537 222053 ~ 222787 (+) True G48636
TU60784 lncRNA upstream 37537 222079 ~ 222787 (+) False G48636
TU60887 lncRNA downstream 2112 264020 ~ 264390 (+) True G48720
TU60888 lncRNA downstream 4666 266574 ~ 266881 (+) True G48721
TU60975 lncRNA downstream 165973 427881 ~ 488584 (+) True G48796
TU60985 lncRNA downstream 177075 438983 ~ 444637 (+) True G48803
TU60988 lncRNA downstream 194741 456649 ~ 458299 (+) True G48806
AMCG00008374 mRNA upstream 4102 253479 ~ 256222 (+) True AMCG00008374
AMCG00008372 mRNA upstream 17270 234895 ~ 243054 (+) True AMCG00008372
AMCG00008371 mRNA upstream 41449 214645 ~ 218875 (+) True AMCG00008371
AMCG00008375 mRNA upstream 55929 153189 ~ 204395 (+) True AMCG00008375
AMCG00008367 mRNA upstream 132595 127056 ~ 127729 (+) True AMCG00008367
AMCG00008373 mRNA downstream 7852 269760 ~ 273986 (+) True AMCG00008373
AMCG00008386 mRNA downstream 46078 307986 ~ 311984 (+) True AMCG00008386
AMCG00008384 mRNA downstream 65715 327623 ~ 340268 (+) True AMCG00008384
AMCG00008389 mRNA downstream 79854 341762 ~ 344446 (+) True AMCG00008389
AMCG00008385 mRNA downstream 90658 352566 ~ 358341 (+) True AMCG00008385
TU60768 other upstream 92826 166958 ~ 167498 (+) False AMCG00008375
TU60757 other upstream 167444 87317 ~ 92880 (+) False AMCG00008369
TU60995 other downstream 288373 550281 ~ 551906 (+) True G48811
TU61033 other downstream 325372 587280 ~ 588446 (+) True G48846
TU61256 other downstream 614646 876554 ~ 879513 (+) True G49013
TU61359 other downstream 703930 965838 ~ 968583 (+) True AMCG00008423
TU61499 other downstream 1060903 1322811 ~ 1324269 (+) True G49208

Expression Profile