Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008433 |
| length | 1032 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 7 |
| gene id | AMCG00008433 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 1076130 ~ 1078396 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006703 | estrogen biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004303 | estradiol 17-beta-dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K11150 | RDH8; retinol dehydrogenase 8 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU61377 | lncRNA | upstream | 8097 | 1063549 ~ 1068033 (+) | True | G49102 |
| TU61335 | lncRNA | upstream | 139849 | 933145 ~ 936281 (+) | True | G49069 |
| TU61332 | lncRNA | upstream | 145303 | 929706 ~ 930827 (+) | True | G49066 |
| TU61233 | lncRNA | upstream | 292149 | 765871 ~ 783981 (+) | False | G48996 |
| TU61232 | lncRNA | upstream | 292149 | 782180 ~ 783981 (+) | True | G48996 |
| TU61371 | lncRNA | downstream | 1625 | 1080021 ~ 1117780 (+) | True | G49097 |
| TU61383 | lncRNA | downstream | 8174 | 1086570 ~ 1087158 (+) | True | G49107 |
| TU61386 | lncRNA | downstream | 14325 | 1092721 ~ 1096634 (+) | True | G49110 |
| TU61466 | lncRNA | downstream | 84087 | 1162483 ~ 1162690 (+) | True | G49178 |
| TU61514 | lncRNA | downstream | 428317 | 1506713 ~ 1506935 (+) | True | G49221 |
| AMCG00008432 | mRNA | upstream | 20375 | 1052595 ~ 1055755 (+) | True | AMCG00008432 |
| AMCG00008430 | mRNA | upstream | 42819 | 1010395 ~ 1033311 (+) | True | AMCG00008430 |
| AMCG00008431 | mRNA | upstream | 81311 | 985977 ~ 994819 (+) | True | AMCG00008431 |
| AMCG00008424 | mRNA | upstream | 92474 | 976227 ~ 983656 (+) | True | AMCG00008424 |
| AMCG00008423 | mRNA | upstream | 108126 | 965880 ~ 968004 (+) | False | AMCG00008423 |
| AMCG00008441 | mRNA | downstream | 160968 | 1239364 ~ 1245755 (+) | True | AMCG00008441 |
| AMCG00008445 | mRNA | downstream | 179125 | 1257521 ~ 1260216 (+) | True | AMCG00008445 |
| AMCG00008446 | mRNA | downstream | 202232 | 1280628 ~ 1288082 (+) | True | AMCG00008446 |
| AMCG00008444 | mRNA | downstream | 237211 | 1315607 ~ 1322747 (+) | True | AMCG00008444 |
| AMCG00008447 | mRNA | downstream | 365781 | 1444177 ~ 1444458 (+) | True | AMCG00008447 |
| TU61359 | other | upstream | 107547 | 965838 ~ 968583 (+) | True | AMCG00008423 |
| TU61256 | other | upstream | 196617 | 876554 ~ 879513 (+) | True | G49013 |
| TU61033 | other | upstream | 487684 | 587280 ~ 588446 (+) | True | G48846 |
| TU60995 | other | upstream | 524224 | 550281 ~ 551906 (+) | True | G48811 |
| TU60768 | other | upstream | 908632 | 166958 ~ 167498 (+) | False | AMCG00008375 |
| TU61499 | other | downstream | 244415 | 1322811 ~ 1324269 (+) | True | G49208 |
| TU61614 | other | downstream | 852258 | 1930654 ~ 1936502 (+) | True | G49298 |
| TU61588 | other | downstream | 1013565 | 2091961 ~ 2105573 (+) | False | AMCG00008475 |
| TU61627 | other | downstream | 1049319 | 2127715 ~ 2143310 (+) | True | AMCG00008476 |
| TU61670 | other | downstream | 1131087 | 2209483 ~ 2211514 (+) | True | G49340 |
