RNA id: AMCG00008459



Basic Information


Item Value
RNA id AMCG00008459
length 342
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00008459
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1794811 ~ 1795802 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAGGAGATACGAGAGGAGGAGTGTGCTACTCCCTGTACTGTCTTGGTTCCTTTGGACTGTGAGGATATTTACCGCTACTTCTCGAGAGTCTCGGGAGTGTACCACATCTACCCTGCGGGGCCCTACATCCCCGTCAACGTCTACTGTGACATGGAGACGGACGGCGGGAAGTGGACGAACATCCACCTCCTCACACTGAGGAAGAGCTATGAGCTGAGGGTGGACCTGGAGGACTTTGAAGGGGCCAAAGCTTATGCCCAGTACTCGTCCTTCTCCATCGCCCCTGATGCTGTGAATGCAGAGGCGGACGGGTACTCTCTCCATGTCGGTGGCTTCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU61531 lncRNA upstream 53234 1642430 ~ 1741577 (+) True G49236
TU61528 lncRNA upstream 163268 1629940 ~ 1631543 (+) True G49233
TU61523 lncRNA upstream 166478 1625397 ~ 1628333 (+) True AMCG00008451
TU61514 lncRNA upstream 287876 1506713 ~ 1506935 (+) True G49221
TU61466 lncRNA upstream 632121 1162483 ~ 1162690 (+) True G49178
TU61564 lncRNA downstream 4059 1799861 ~ 1856256 (+) True G49261
TU61567 lncRNA downstream 8023 1803825 ~ 1806027 (+) True G49264
TU61576 lncRNA downstream 19782 1815584 ~ 1848738 (+) True G49270
TU61582 lncRNA downstream 42384 1838186 ~ 1839004 (+) True G49271
TU61609 lncRNA downstream 113021 1908823 ~ 1910419 (+) True G49294
AMCG00008454 mRNA upstream 57296 1718172 ~ 1737515 (+) True AMCG00008454
AMCG00008455 mRNA upstream 77944 1711117 ~ 1716867 (+) True AMCG00008455
AMCG00008451 mRNA upstream 166740 1625294 ~ 1628071 (+) False AMCG00008451
AMCG00008450 mRNA upstream 288237 1497221 ~ 1506574 (+) True AMCG00008450
AMCG00008448 mRNA upstream 308408 1485010 ~ 1486403 (+) True AMCG00008448
AMCG00008461 mRNA downstream 542 1796344 ~ 1801758 (+) True AMCG00008461
AMCG00008458 mRNA downstream 78235 1874037 ~ 1880962 (+) True AMCG00008458
AMCG00008460 mRNA downstream 88565 1884367 ~ 1889767 (+) True AMCG00008460
AMCG00008468 mRNA downstream 95294 1891096 ~ 1894227 (+) True AMCG00008468
AMCG00008472 mRNA downstream 234986 2030788 ~ 2046937 (+) True AMCG00008472
TU61499 other upstream 470542 1322811 ~ 1324269 (+) True G49208
TU61359 other upstream 826228 965838 ~ 968583 (+) True AMCG00008423
TU61256 other upstream 915298 876554 ~ 879513 (+) True G49013
TU61033 other upstream 1206365 587280 ~ 588446 (+) True G48846
TU60995 other upstream 1242905 550281 ~ 551906 (+) True G48811
TU61614 other downstream 134852 1930654 ~ 1936502 (+) True G49298
TU61588 other downstream 296159 2091961 ~ 2105573 (+) False AMCG00008475
TU61627 other downstream 331913 2127715 ~ 2143310 (+) True AMCG00008476
TU61670 other downstream 413681 2209483 ~ 2211514 (+) True G49340
TU61936 other downstream 970077 2765879 ~ 2770044 (+) True G49523

Expression Profile