RNA id: AMCG00008514



Basic Information


Item Value
RNA id AMCG00008514
length 246
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00008514
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 3020595 ~ 3021066 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atggaggtGGGGGACTCTCTAAACACCCGTGGGGCACCACACCCTCACCGCTGGAGCCCTGAGCCCGCCTGCGTTGGCTTCagcacatttctatttttgacCCGCCGGCTGTCGGTGTGCTGGCAGTGCCAAAGCCCTGGTTTCAGTTGTCGGATCTTCAAACCGAGACCGAAGCGGCCGATTACGGTTAGTGCAGGCATGTTCGACATGCAAACCGTGGTGGTGTTTCTGAAGTACGCCACGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU62039 lncRNA upstream 109656 2910694 ~ 2910939 (+) True G49599
TU62038 lncRNA upstream 109967 2909662 ~ 2910628 (+) True G49598
TU62010 lncRNA upstream 134457 2885831 ~ 2886138 (+) True G49582
TU61966 lncRNA upstream 207702 2812174 ~ 2812893 (+) True G49541
TU61817 lncRNA upstream 555928 2445185 ~ 2464667 (+) True G49431
TU62082 lncRNA downstream 6912 3027978 ~ 3042595 (+) True G49636
TU62224 lncRNA downstream 335633 3356699 ~ 3359529 (+) True G49738
TU62242 lncRNA downstream 393115 3414181 ~ 3443897 (+) True G49754
TU62240 lncRNA downstream 408831 3429897 ~ 3885604 (+) True AMCG00008526
TU62241 lncRNA downstream 422936 3444002 ~ 3445127 (+) True G49753
AMCG00008510 mRNA upstream 674 3016456 ~ 3019921 (+) True AMCG00008510
AMCG00008509 mRNA upstream 17035 2994941 ~ 3003560 (+) True AMCG00008509
AMCG00008505 mRNA upstream 113654 2904559 ~ 2906941 (+) True AMCG00008505
AMCG00008497 mRNA upstream 197499 2815396 ~ 2823096 (+) True AMCG00008497
AMCG00008498 mRNA upstream 209296 2798540 ~ 2811299 (+) True AMCG00008498
AMCG00008516 mRNA downstream 66114 3087180 ~ 3102783 (+) True AMCG00008516
AMCG00008515 mRNA downstream 98043 3119109 ~ 3124136 (+) True AMCG00008515
AMCG00008517 mRNA downstream 110814 3131880 ~ 3137332 (+) True AMCG00008517
AMCG00008523 mRNA downstream 332039 3353105 ~ 3355395 (+) True AMCG00008523
AMCG00008525 mRNA downstream 396445 3417511 ~ 3426260 (+) True AMCG00008525
TU62012 other upstream 131699 2886766 ~ 2888896 (+) True G49583
TU61936 other upstream 250551 2765879 ~ 2770044 (+) True G49523
TU61670 other upstream 809081 2209483 ~ 2211514 (+) True G49340
TU61627 other upstream 877285 2127715 ~ 2143310 (+) True AMCG00008476
TU61588 other upstream 915022 2091961 ~ 2105573 (+) False AMCG00008475
TU62528 other downstream 1135022 4156088 ~ 4160062 (+) True G49980
TU62530 other downstream 1140992 4162058 ~ 4165483 (+) True G49982
TU62655 other downstream 1540925 4561991 ~ 4572734 (+) True AMCG00008580
TU62810 other downstream 2574957 5596023 ~ 5596799 (+) True G50215
TU62843 other downstream 2717475 5738541 ~ 5742750 (+) True G50243

Expression Profile