Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008556 |
| length | 1287 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 10 |
| gene id | AMCG00008556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 3934002 ~ 3939913 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | molecular_function |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| GO:0003995 | acyl-CoA dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K00252 | GCDH, gcdH; glutaryl-CoA dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62240 | lncRNA | upstream | 48398 | 3429897 ~ 3885604 (+) | True | AMCG00008526 |
| TU62241 | lncRNA | upstream | 488875 | 3444002 ~ 3445127 (+) | True | G49753 |
| TU62242 | lncRNA | upstream | 490105 | 3414181 ~ 3443897 (+) | True | G49754 |
| TU62224 | lncRNA | upstream | 574473 | 3356699 ~ 3359529 (+) | True | G49738 |
| TU62082 | lncRNA | upstream | 891407 | 3027978 ~ 3042595 (+) | True | G49636 |
| TU62428 | lncRNA | downstream | 23215 | 3963128 ~ 3964014 (+) | True | G49914 |
| TU62458 | lncRNA | downstream | 85188 | 4025101 ~ 4026246 (+) | True | G49938 |
| TU62464 | lncRNA | downstream | 94836 | 4034749 ~ 4035052 (+) | True | G49944 |
| TU62565 | lncRNA | downstream | 367913 | 4307826 ~ 4308836 (+) | True | G50011 |
| TU62622 | lncRNA | downstream | 522449 | 4462362 ~ 4468763 (+) | True | G50055 |
| AMCG00008552 | mRNA | upstream | 72612 | 3856572 ~ 3861390 (+) | True | AMCG00008552 |
| AMCG00008551 | mRNA | upstream | 89382 | 3837133 ~ 3844620 (+) | True | AMCG00008551 |
| AMCG00008550 | mRNA | upstream | 99423 | 3823994 ~ 3834579 (+) | True | AMCG00008550 |
| AMCG00008549 | mRNA | upstream | 114826 | 3811585 ~ 3819176 (+) | True | AMCG00008549 |
| AMCG00008548 | mRNA | upstream | 124930 | 3789595 ~ 3809072 (+) | True | AMCG00008548 |
| AMCG00008555 | mRNA | downstream | 17628 | 3957541 ~ 3961050 (+) | True | AMCG00008555 |
| AMCG00008560 | mRNA | downstream | 69285 | 4009198 ~ 4010145 (+) | True | AMCG00008560 |
| AMCG00008559 | mRNA | downstream | 82612 | 4022525 ~ 4023493 (+) | True | AMCG00008559 |
| AMCG00008569 | mRNA | downstream | 157883 | 4097796 ~ 4098156 (+) | True | AMCG00008569 |
| AMCG00008579 | mRNA | downstream | 571077 | 4510990 ~ 4512060 (+) | True | AMCG00008579 |
| TU62012 | other | upstream | 1045106 | 2886766 ~ 2888896 (+) | True | G49583 |
| TU61936 | other | upstream | 1163958 | 2765879 ~ 2770044 (+) | True | G49523 |
| TU61670 | other | upstream | 1722488 | 2209483 ~ 2211514 (+) | True | G49340 |
| TU61627 | other | upstream | 1790692 | 2127715 ~ 2143310 (+) | True | AMCG00008476 |
| TU61588 | other | upstream | 1828429 | 2091961 ~ 2105573 (+) | False | AMCG00008475 |
| TU62528 | other | downstream | 216175 | 4156088 ~ 4160062 (+) | True | G49980 |
| TU62530 | other | downstream | 222145 | 4162058 ~ 4165483 (+) | True | G49982 |
| TU62655 | other | downstream | 622078 | 4561991 ~ 4572734 (+) | True | AMCG00008580 |
| TU62810 | other | downstream | 1656110 | 5596023 ~ 5596799 (+) | True | G50215 |
| TU62843 | other | downstream | 1798628 | 5738541 ~ 5742750 (+) | True | G50243 |
