Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008607 |
| length | 507 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | AMCG00008607 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 5844345 ~ 5847681 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62809 | lncRNA | upstream | 249293 | 5594712 ~ 5595052 (+) | True | G50214 |
| TU62808 | lncRNA | upstream | 251414 | 5592436 ~ 5592931 (+) | True | G50213 |
| TU62807 | lncRNA | upstream | 253144 | 5586800 ~ 5591201 (+) | True | G50212 |
| TU62800 | lncRNA | upstream | 264323 | 5579222 ~ 5580022 (+) | True | G50206 |
| TU62788 | lncRNA | upstream | 283736 | 5560021 ~ 5560609 (+) | True | G50196 |
| TU62856 | lncRNA | downstream | 93526 | 5941207 ~ 5941527 (+) | True | G50255 |
| TU62949 | lncRNA | downstream | 495013 | 6342694 ~ 6342978 (+) | True | G50336 |
| TU62953 | lncRNA | downstream | 524751 | 6372432 ~ 6372911 (+) | True | G50340 |
| TU62955 | lncRNA | downstream | 526984 | 6374665 ~ 6375034 (+) | True | G50342 |
| TU62960 | lncRNA | downstream | 642976 | 6490657 ~ 6518591 (+) | True | G50346 |
| AMCG00008605 | mRNA | upstream | 67663 | 5766764 ~ 5776682 (+) | True | AMCG00008605 |
| AMCG00008606 | mRNA | upstream | 86710 | 5744804 ~ 5757635 (+) | True | AMCG00008606 |
| AMCG00008601 | mRNA | upstream | 208597 | 5614919 ~ 5635748 (+) | True | AMCG00008601 |
| AMCG00008594 | mRNA | upstream | 735541 | 5094364 ~ 5108804 (+) | True | AMCG00008594 |
| AMCG00008593 | mRNA | upstream | 788589 | 5042754 ~ 5055756 (+) | True | AMCG00008593 |
| AMCG00008604 | mRNA | downstream | 34312 | 5881993 ~ 5883048 (+) | True | AMCG00008604 |
| AMCG00008616 | mRNA | downstream | 183166 | 6030847 ~ 6045870 (+) | True | AMCG00008616 |
| AMCG00008617 | mRNA | downstream | 261282 | 6108963 ~ 6119352 (+) | True | AMCG00008617 |
| AMCG00008618 | mRNA | downstream | 340813 | 6188494 ~ 6207751 (+) | True | AMCG00008618 |
| AMCG00008619 | mRNA | downstream | 458045 | 6305726 ~ 6363030 (+) | True | AMCG00008619 |
| TU62843 | other | upstream | 101595 | 5738541 ~ 5742750 (+) | True | G50243 |
| TU62810 | other | upstream | 247546 | 5596023 ~ 5596799 (+) | True | G50215 |
| TU62655 | other | upstream | 1271611 | 4561991 ~ 4572734 (+) | True | AMCG00008580 |
| TU62530 | other | upstream | 1678862 | 4162058 ~ 4165483 (+) | True | G49982 |
| TU62528 | other | upstream | 1684283 | 4156088 ~ 4160062 (+) | True | G49980 |
| TU63090 | other | downstream | 1109930 | 6957611 ~ 7018125 (+) | True | G50448 |
| TU63267 | other | downstream | 2086148 | 7933829 ~ 7939771 (+) | True | G50583 |
| TU63268 | other | downstream | 2086148 | 7933829 ~ 7939771 (+) | False | G50583 |
| TU63407 | other | downstream | 2465744 | 8313425 ~ 8317602 (+) | True | AMCG00008664 |
| TU63473 | other | downstream | 2602485 | 8450166 ~ 8666548 (+) | True | G50747 |
