RNA id: AMCG00008631



Basic Information


Item Value
RNA id AMCG00008631
length 357
RNA type mRNA
GC content 0.54
exon number 3
gene id AMCG00008631
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6798763 ~ 6804508 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGGTGGGTGTTGCATCCTGTCTGCTCACACCCACAGCGTCTCCGGGAGACACAGACGTGAGCGAGGAGAGAGTTCTGAATGGAGAGATCTTTGTGAAGTCTGAGAAGCCCAGTGTGGACCCAATGGACTGGACAGTGTCGGACGTGGTCAGCTATTTCACGGCGGCTGGATTTGGGGAGCAGGCCAGCGCTTTCAGGATGCAGGAAATTGATGGAAAATCCCTCCTTCTCATGCAGCGGAATGATGTGCTGACAGGGCTGTCAATCAGACTTGGCCCTGCCCTCAAGATCTATGAATATCATGTCAAGGAGCTCCAGAGGACCCACTTCCAGGATGACAGCGCACTGTGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63004 lncRNA downstream 92474 6692806 ~ 6706289 (-) True G50381
TU62993 lncRNA downstream 147420 6647011 ~ 6651343 (-) True G50372
TU62994 lncRNA downstream 147466 6647641 ~ 6651297 (-) False G50372
TU62980 lncRNA downstream 171738 6626109 ~ 6627025 (-) True G50361
TU63071 lncRNA upstream 34569 6839077 ~ 6885687 (-) False AMCG00008633
TU63069 lncRNA upstream 38019 6842527 ~ 6885687 (-) True AMCG00008633
TU63077 lncRNA upstream 99569 6904077 ~ 6904389 (-) True G50435
TU63079 lncRNA upstream 100832 6905340 ~ 6905577 (-) True G50437
TU63139 lncRNA upstream 120420 6924928 ~ 6925980 (-) True AMCG00008634
AMCG00008627 mRNA downstream 56534 6720582 ~ 6742229 (-) True AMCG00008627
AMCG00008628 mRNA downstream 79679 6716109 ~ 6719084 (-) True AMCG00008628
AMCG00008623 mRNA downstream 124141 6666863 ~ 6674622 (-) True AMCG00008623
AMCG00008624 mRNA downstream 139519 6651424 ~ 6659244 (-) True AMCG00008624
AMCG00008625 mRNA downstream 198502 6591233 ~ 6600261 (-) True AMCG00008625
AMCG00008630 mRNA upstream 15456 6819964 ~ 6829699 (-) True AMCG00008630
AMCG00008633 mRNA upstream 43071 6847579 ~ 6862818 (-) False AMCG00008633
AMCG00008632 mRNA upstream 104266 6908774 ~ 6915444 (-) True AMCG00008632
AMCG00008634 mRNA upstream 116199 6920707 ~ 6933089 (-) False AMCG00008634
AMCG00008635 mRNA upstream 195046 6999554 ~ 7009561 (-) True AMCG00008635
TU62870 other downstream 913313 5748890 ~ 5885450 (-) True G50267
TU62882 other downstream 1006179 5787750 ~ 5792584 (-) False AMCG00008608
TU62371 other downstream 3021409 3774583 ~ 3777354 (-) True AMCG00008547
TU62046 other downstream 3890098 2906675 ~ 2908665 (-) True G49605
TU61772 other downstream 4713757 2078703 ~ 2085006 (-) True AMCG00008474
TU63135 other upstream 143381 6947889 ~ 7151472 (-) False G50476
TU63134 other upstream 341117 7145625 ~ 7151472 (-) True G50476
TU63287 other upstream 1096827 7901335 ~ 7902606 (-) True G50602
TU63350 other upstream 1330073 8134581 ~ 8135414 (-) True G50656
TU63425 other upstream 1464515 8269023 ~ 8269326 (-) True G50710

Expression Profile